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Report for CCDS4998.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4998.1 Public Homo sapiens 6 RWDD2A 24 110 108 CCDS HistoryNCBI Gene:112611Re-query CCDS DB by CCDS ID:4998.1Re-query CCDS DB by GeneID:112611See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 4998.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000369724.5 ENSP00000358739.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000369724.5Link to Ensembl Protein Viewer:ENSP00000358739.3Re-query CCDS DB by Nucleotide ID:ENST00000369724Re-query CCDS DB by Protein ID:ENSP00000358739
Original member Current member NCBI NM_033411.5 NP_219479.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_033411.5Link to Protein Sequence:NP_219479.2Re-query CCDS DB by Nucleotide ID:NM_033411Re-query CCDS DB by Protein ID:NP_219479Link to BLAST:NP_219479.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_219479.2 292 Q9UIY3-1 292 100% 0 0

Chromosomal Locations for CCDS 4998.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 83194452 83194652 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 83195595 83196272 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (879 nt):
ATGTCTGCTTCGGTGAAAGAAAGCCTTCAGCTTCAGCTACTGGAGATGGAAATGCTGTTTTCTATGTTTC
CTAACCAAGGAGAAGTAAAACTTGAAGATGTAAATGCCCTGACGAATATAAAGAGGTATTTGGAAGGCAC
AAGGGAGGCGCTGCCACCAAAAATCGAATTTGTAATTACACTCCAGATTGAAGAGCCCAAGGTGAAAATT
GATTTGCAAGTGACCATGCCTCACAGCTACCCCTATGTAGCATTGCAGCTGTTTGGACGGTCATCTGAAC
TTGACAGACATCAGCAGCTACTTCTCAACAAAGGTCTCACTTCTTACATAGGGACTTTTGATCCAGGTGA
GCTCTGTGTATGTGCAGCAATCCAGTGGCTACAGGACAACAGTGCATCTTATTTCCTGAACAGAAAGCTT
GTATATGAACCATCTACACAAGCAAAGCCAGTCAAGAACACATTCCTCCGAATGTGGATCTACAGTCACC
ATATATATCAGCAGGACCTAAGGAAAAAGATTTTGGATGTTGGGAAAAGGTTAGATGTGACTGGATTTTG
CATGACAGGAAAGCCTGGTATAATCTGTGTGGAGGGTTTCAAAGAGCACTGTGAGGAGTTCTGGCACACA
ATTAGGTACCCCAATTGGAAGCACATTTCCTGTAAGCATGCTGAAAGCGTGGAGACAGAAGGAAATGGTG
AGGACCTGCGCCTTTTCCATTCTTTTGAAGAGTTACTCCTTGAGGCTCATGGTGACTATGGATTAAGGAA
TGACTATCACATGAATCTGGGCCAATTCTTAGAATTTCTCAAGAAGCACAAAAGTGAGCATGTTTTTCAG
ATACTATTTGGTATTGAAAGCAAAAGTTCAGACTCATAA

Translation (292 aa):
MSASVKESLQLQLLEMEMLFSMFPNQGEVKLEDVNALTNIKRYLEGTREALPPKIEFVITLQIEEPKVKI
DLQVTMPHSYPYVALQLFGRSSELDRHQQLLLNKGLTSYIGTFDPGELCVCAAIQWLQDNSASYFLNRKL
VYEPSTQAKPVKNTFLRMWIYSHHIYQQDLRKKILDVGKRLDVTGFCMTGKPGIICVEGFKEHCEEFWHT
IRYPNWKHISCKHAESVETEGNGEDLRLFHSFEELLLEAHGDYGLRNDYHMNLGQFLEFLKKHKSEHVFQ
ILFGIESKSSDS


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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