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Report for CCDS50530.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
50530.1 Public Mus musculus 2 Fut7 23 108 98 CCDS HistoryNCBI Gene:14347Re-query CCDS DB by CCDS ID:50530.1Re-query CCDS DB by GeneID:14347See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 50530.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000100320.4 ENSMUSP00000097895.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000100320.4Link to Ensembl Protein Viewer:ENSMUSP00000097895.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000100320Re-query CCDS DB by Protein ID:ENSMUSP00000097895
Original member Current member NCBI NM_001177366.1 NP_001170837.1 Accepted alive Link to Nucleotide Sequence:NM_001177366.1Link to Protein Sequence:NP_001170837.1Re-query CCDS DB by Nucleotide ID:NM_001177366Re-query CCDS DB by Protein ID:NP_001170837Link to BLAST:NP_001170837.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001170837.1 389 Q11131-1 389 100% 0 0

Chromosomal Locations for CCDS 50530.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 25423815 25423968 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 25424886 25425901 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1170 nt):
ATGCCAACCCCCTGCCCACCAGCCTGCCTGTCCACGCCAGGGACACACAGACTCCTTCCCTTTCCAGACT
GGAAAGCCCCCTCCTGGGAGAGCAGGAAGGAAGCAACCTGCAACTCTTCCAGCCCTGGACCTTGGGCTGA
ACCTACAGTTCAAGGGTACCACCCCACCAGGAGGCTGCGGGCCTGGGGCGGCCTAGCTGGAGGAGCAACA
TTCATGGTAATTTGGTTTTTCTGGCTGTGGGGATCAGCTCCTGGAAGTGCCCCTGTGCCTCAGTCCACAC
TCACCATCCTTATCTGGCACTGGCCTTTCACCAACCGGCCGCCAGAGCTACCTGGTGACACCTGCACTCG
CTATGGCATGGCCAGCTGCCGTCTGAGTGCTAACCGGAGCCTGCTAGCCAGTGCTGATGCTGTGGTCTTC
CACCACCGTGAGCTGCAAACCCGGCAATCTCTCCTACCCCTGGACCAGAGGCCACACGGACAGCCTTGGG
TCTGGGCCTCCATGGAATCGCCCAGTAATACCCATGGTCTCCATCGCTTCCGGGGCATCTTCAACTGGGT
GCTGAGCTATCGGCGTGATTCAGATATCTTTGTACCCTACGGTCGCTTGGAGCCTCTCTCTGGGCCCACA
TCCCCACTACCGGCCAAAAGCAGGATGGCTGCCTGGGTGATCAGCAATTTCCAGGAGCGGCAGCAGCGTG
CAAAGCTGTACCGGCAGCTGGCCCCTCATCTGCAGGTGGATGTGTTCGGTCGCGCCAGCGGACGGCCCCT
ATGCGCTAATTGTCTGCTGCCCACTTTGGCCCGGTACCGCTTCTACCTGGCCTTTGAGAACTCACAGCAT
CGGGACTACATCACTGAGAAGTTCTGGCGCAATGCCCTGGCGGCTGGTGCTGTACCCGTGGCGCTGGGAC
CTCCTCGGGCCACCTACGAGGCTTTTGTGCCACCAGATGCCTTTGTACACGTGGACGACTTCAGCTCTGC
CCGTGAACTGGCTGTCTTCCTCGTCAGCATGAATGAGAGTCGTTATCGTGGCTTCTTTGCTTGGCGAGAC
CGGCTCCGTGTGCGGCTCCTGGGTGACTGGAGGGAGCGCTTCTGCACCATCTGTGCCCGCTACCCTTACT
TGCCCCGCAGCCAGGTCTATGAAGACCTTGAAAGCTGGTTCCAGGCTTGA

Translation (389 aa):
MPTPCPPACLSTPGTHRLLPFPDWKAPSWESRKEATCNSSSPGPWAEPTVQGYHPTRRLRAWGGLAGGAT
FMVIWFFWLWGSAPGSAPVPQSTLTILIWHWPFTNRPPELPGDTCTRYGMASCRLSANRSLLASADAVVF
HHRELQTRQSLLPLDQRPHGQPWVWASMESPSNTHGLHRFRGIFNWVLSYRRDSDIFVPYGRLEPLSGPT
SPLPAKSRMAAWVISNFQERQQRAKLYRQLAPHLQVDVFGRASGRPLCANCLLPTLARYRFYLAFENSQH
RDYITEKFWRNALAAGAVPVALGPPRATYEAFVPPDAFVHVDDFSSARELAVFLVSMNESRYRGFFAWRD
RLRVRLLGDWRERFCTICARYPYLPRSQVYEDLESWFQA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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