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Report for CCDS50748.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
50748.1 Public Mus musculus 2 Tmem74b 23 108 98 CCDS HistoryNCBI Gene:108832Re-query CCDS DB by CCDS ID:50748.1Re-query CCDS DB by GeneID:108832See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 50748.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000060196.2 ENSMUSP00000060017.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000060196.2Link to Ensembl Protein Viewer:ENSMUSP00000060017.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000060196Re-query CCDS DB by Protein ID:ENSMUSP00000060017
Original member Current member EBI ENSMUST00000109872.1 ENSMUSP00000105498.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000109872.1Link to Ensembl Protein Viewer:ENSMUSP00000105498.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000109872Re-query CCDS DB by Protein ID:ENSMUSP00000105498
Original member NCBI NM_001160363.1 NP_001153835.1 Updated not alive Link to Nucleotide Sequence:NM_001160363.1Link to Protein Sequence:NP_001153835.1Re-query CCDS DB by Nucleotide ID:NM_001160363Re-query CCDS DB by Protein ID:NP_001153835
Current member NCBI NM_001160363.2 NP_001153835.1 Accepted alive Link to Nucleotide Sequence:NM_001160363.2Link to Protein Sequence:NP_001153835.1Re-query CCDS DB by Nucleotide ID:NM_001160363Re-query CCDS DB by Protein ID:NP_001153835Link to BLAST:NP_001153835.1

Chromosomal Locations for CCDS 50748.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 151706355 151707053 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (699 nt):
ATGGCATCTCCCCCTGGTCTGGAACTGAAGACATTGAGCAATGGTCCCCAGGTTCCAAGGAGAGCGGCCT
CGCAGGGCCCCGTGGCGCCACCCAGGATGGGTGTGGAGAATGCCTGCTTCTTCTCTGAGGAGCAGGAGAC
TCATTTCCAGAACCCTGGGGATGCCAGACTGGGTAACGCCCCCAGTCCCCCTGGAGGTGTCCCCTCACTG
TCCCGGTCCCAGCGGGATGATCTTTCTTTGCATTCAGAGGAGGGACCAGGCCTGGAACCTGTGAGCCGCC
CGGTGGACTATGGCTTTGTTTCTGCTCTGGTTTTCTTGGTGAGCGGAATCCTCCTGGTGGTGACAGCATA
CGCCATCCCCCGAGAGGCCCGGGTCAACCCTGACACAGTGACAGCAAGGGAGATGGAACGCCTGGAGATG
TACTACGCCCGCTTGGGCTCACATCTGGACAAATGCATCATTGCGGGCCTCGGGCTGCTCACAGTGGGTG
GCATGCTCCTCTCTGTGCTGCTCATGGTCTCTCTGTGCAAGGGAGAGCTGTACCGCAGACAGACCTTTGT
CCCCGGCAGGGGATCCAGAAAGACCTATGGCTCCATCAACCTGCGTATGAGGCAGCTCACTGGGGACGGA
GGCCAGGTCCTAGTAGAGAATGAGGTTGTTCAAGTCTCAGAGACCAGCTATACCACTCAGGGCTCCTAA

Translation (232 aa):
MASPPGLELKTLSNGPQVPRRAASQGPVAPPRMGVENACFFSEEQETHFQNPGDARLGNAPSPPGGVPSL
SRSQRDDLSLHSEEGPGLEPVSRPVDYGFVSALVFLVSGILLVVTAYAIPREARVNPDTVTAREMERLEM
YYARLGSHLDKCIIAGLGLLTVGGMLLSVLLMVSLCKGELYRRQTFVPGRGSRKTYGSINLRMRQLTGDG
GQVLVENEVVQVSETSYTTQGS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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