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Report for CCDS51203.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
51203.1 Public Mus musculus 4 Zfp618 23 108 98 CCDS HistoryNCBI Gene:72701Re-query CCDS DB by CCDS ID:51203.1Re-query CCDS DB by GeneID:72701See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 51203.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000064814.5 ENSMUSP00000069275.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000064814.5Link to Ensembl Protein Viewer:ENSMUSP00000069275.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000064814Re-query CCDS DB by Protein ID:ENSMUSP00000069275
Original member Current member NCBI NM_028326.2 NP_082602.1 Accepted alive Link to Nucleotide Sequence:NM_028326.2Link to Protein Sequence:NP_082602.1Re-query CCDS DB by Nucleotide ID:NM_028326Re-query CCDS DB by Protein ID:NP_082602Link to BLAST:NP_082602.1

Chromosomal Locations for CCDS 51203.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 62965674 62965706 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 63061521 63061564 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 63079840 63080096 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 63089366 63089443 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 63090005 63090043 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 63094432 63094521 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 63095348 63095383 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 63095477 63095554 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 63096891 63096934 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 63099280 63099295 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 63103514 63103603 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 63118549 63118629 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 63121331 63121408 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 63131108 63131209 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 63132329 63133845 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2583 nt):
ATGAGCCAGCCGGACGGCGCGGCAGCTCCGCAGGTGGACGGAGCCAGTGCACCTGGAAGGAAAAGCGCGG
TTAACAGGGAACGCTTGAAGCGCAGTCAAAAGAGCAGCAAGGTGGAGGGCCCGGAGCCAGTGCCGGCTGA
GGCCTCGCTGAGTGCTGAGCAGGGGACGATGACGGAGGTGAAGGTGAAAACAGAAGTACCAGACGACTAC
ATACAGGAGGTCATCTGGCAGGGGGAGGCCAAGGAGGAGAAGGCAGGTGGCAAGGACAGCACCGGAGATG
TGCCTGCCGAGATCTGCGTGGTGATTGGTGGCGTCCGCAACCAGCAGACCCTAGGGTCCTATGAATGCGG
GATCTGCGGCAAGAAGTACAAGTACTACAACTGCTTCCAGACGCACGTGCGGGCACACCGAGATACTGAA
GCCACCTCAGGGGAGGGAGTCTCCCAGAGCAACAATTTCAGGTACACATGTGACATCTGTGGGAAGAAAT
ACAAATACTACAGCTGCTTCCAGGAGCACCGAGATCTCCATGCTGTGGATGTGTTCAGTGTGGAAGGGGC
TCCCGAGAACCGGGCAGACCCCTTTGACCAAGGTGTCGTGGCTACTGATGAGGTGAAGGAGGAGCCCCCA
GAGCCTTTCCAGAAAATTGGACCAATGTCCAGCCCAGTTTCTGCCTCTTATCCAAGGTGTGAGATGAGGA
TGTGTGAACAAAGAAAAACCGGCAATTACACCTGTGAGTTCTGTGGGAAGCAATACAAGTACTACACGCC
CTACCAGGAGCACGTGGCCTTACATGCCCCCATCAAAAACACCTTCAGTCGTCGAGTAGAAAGCAAAGCA
CAGAACCACTTTGAAGAGACCAATAGCAGCTCACAAAATTCCAGCGAACCCTACACGTGCGGCGCCTGTG
GGATCCAGTTTCAGTTCTACAGCAACCTGCTGGAGCACATGCAGTCCCACGCAGCTGACAATGAAAACAA
CATCACCTCCAACCAGTCCCGATCTCCACCTGCTGCAGTGGAAGAAAAGTGGAAACCTCAGGCCCAGAGG
AACAGTGCCAACAACACCACAACCAGTGGTTTGACGCCTAACAGTGTAATCCCTGAGAAGGAGCGGCAAA
ACATCGCAGAGCGGCTACTGCGAGTCATGTGCGCTGACCTGGGTGCGCTGAGCGTGGTCAGTGGGAAAGA
GTTCCTCAAGTTGGCTCAAACCTTGGTAGACAGTGGCGCCCGCTACGGGGCCTTCTCGGTCACTGAGATC
TTGGGCAATTTTAACACCTTGGCACTGAAGCACCTGCCACGCATGTACAACCAGGTGAAGGTGAAGGTGA
CATGTGCCCTAGGCAGCAATGCCTGCCTGGGCATAGGTGTCACATGCCACTCCCAGAGCGTGGGCCCTGA
CTCCTGCTACATCCTAACGGCCTACCAGGCTGAGGGTAACCACATCAAGAGCTATGTGCTGGGTGTGAAG
GGGGCAGACATTCGTGACAGTGGTGACTTGGTGCATCACTGGGTGCAGAACGTGCTATCAGAGTTTGTGA
TGTCAGAGATCCGGACCGTATACGTGACAGACTGCCGGGTGAGCACGTCTGCCTTCTCCAAGGCTGGCAT
GTGCCTTCGCTGCTCAGCCTGTGCCTTGAACTCAGTGGTGCAGAGTGTGCTGAGCAAGCGGACGCTGCAG
GCCCGCAGCATGCATGAGGTCATCGAGCTGCTCAACGTGTGTGAGGACCTAGCAGGCTCTACGGGCCTGG
CCAAGGAGACCTTTGGCTCTCTGGAGGAGACGTCACCGCCACCCTGCTGGAACTCAGTGACGGACTCGCT
GCTGCTGGTCCACGAGCGCTATGAGCAGATCTGCGAGTTCTACAGCCGTGCCAAGAAGATGAACCTCATT
CAGAGCCTCAACAAGCACTTGCTGAGCAACCTGGCCGCCATCCTGACCCCTGTGAAGCAGGCTGTCATAG
AGCTGAGCAACGAGAGCCAGCCCACCCTACAGCTCGTGCTCCCTACCTACGTCAGGCTCGAGAAGCTGTT
CACAGCCAAGGCCAACGACGCGGGCACCGTCAGCAAGCTGTGCCATCTCTTTCTGGAAGCGCTCAAGGAG
AACTTCAAGGTGCACCCGGCCCACAAGGTGGCCATGATCCTGGATCCTCAGCAGAAGCTTCGGCCGGTGC
CGCCCTACCAGCACGAGGAGATCATTAGCAAGGTGTGTGAACTCATCAATGAGGTGAAGGAGTCCTGGGC
CGAGGAGGCCGACTTCGAACCTGCTGCCAAGAAGGCTCGCTCAGCCACCGGAGAACACCCCGCCGCTCAG
GAAGAGGACCGGCTGGGCAAGAACGAAGTCTATGATTATCTTCAGGAACCCCTCTTTCAGGCCACTCCTG
ATCTCTTCCAGTACTGGTCATGCGTGACCCAAAAGCACACGAAACTGGCCAAGCTAGCCTTCTGGCTCCT
GGCCGTTCCTGCTGTCGGGGCTCGGAGCGGGTGTGTAAATATGTGTGAACAAGCACTTCTGATCAAAAGG
AGGCGACTGCTTAGTCCTGAAGATATGAACAAGCTCATGTTTTTGAAATCTAACATGCTTTAA

Translation (860 aa):
MSQPDGAAAPQVDGASAPGRKSAVNRERLKRSQKSSKVEGPEPVPAEASLSAEQGTMTEVKVKTEVPDDY
IQEVIWQGEAKEEKAGGKDSTGDVPAEICVVIGGVRNQQTLGSYECGICGKKYKYYNCFQTHVRAHRDTE
ATSGEGVSQSNNFRYTCDICGKKYKYYSCFQEHRDLHAVDVFSVEGAPENRADPFDQGVVATDEVKEEPP
EPFQKIGPMSSPVSASYPRCEMRMCEQRKTGNYTCEFCGKQYKYYTPYQEHVALHAPIKNTFSRRVESKA
QNHFEETNSSSQNSSEPYTCGACGIQFQFYSNLLEHMQSHAADNENNITSNQSRSPPAAVEEKWKPQAQR
NSANNTTTSGLTPNSVIPEKERQNIAERLLRVMCADLGALSVVSGKEFLKLAQTLVDSGARYGAFSVTEI
LGNFNTLALKHLPRMYNQVKVKVTCALGSNACLGIGVTCHSQSVGPDSCYILTAYQAEGNHIKSYVLGVK
GADIRDSGDLVHHWVQNVLSEFVMSEIRTVYVTDCRVSTSAFSKAGMCLRCSACALNSVVQSVLSKRTLQ
ARSMHEVIELLNVCEDLAGSTGLAKETFGSLEETSPPPCWNSVTDSLLLVHERYEQICEFYSRAKKMNLI
QSLNKHLLSNLAAILTPVKQAVIELSNESQPTLQLVLPTYVRLEKLFTAKANDAGTVSKLCHLFLEALKE
NFKVHPAHKVAMILDPQQKLRPVPPYQHEEIISKVCELINEVKESWAEEADFEPAAKKARSATGEHPAAQ
EEDRLGKNEVYDYLQEPLFQATPDLFQYWSCVTQKHTKLAKLAFWLLAVPAVGARSGCVNMCEQALLIKR
RRLLSPEDMNKLMFLKSNML


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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