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Report for CCDS51368.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
51368.1 Public Mus musculus 4 Dhrs3 23 108 98 CCDS HistoryNCBI Gene:20148Re-query CCDS DB by CCDS ID:51368.1Re-query CCDS DB by GeneID:20148See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 51368.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000171001.7 ENSMUSP00000126154.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000171001.7Link to Ensembl Protein Viewer:ENSMUSP00000126154.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000171001Re-query CCDS DB by Protein ID:ENSMUSP00000126154
Original member NCBI NM_001172424.2 NP_001165895.1 Updated not alive Link to Nucleotide Sequence:NM_001172424.2Link to Protein Sequence:NP_001165895.1Re-query CCDS DB by Nucleotide ID:NM_001172424Re-query CCDS DB by Protein ID:NP_001165895
Current member NCBI NM_001172424.3 NP_001165895.1 Accepted alive Link to Nucleotide Sequence:NM_001172424.3Link to Protein Sequence:NP_001165895.1Re-query CCDS DB by Nucleotide ID:NM_001172424Re-query CCDS DB by Protein ID:NP_001165895Link to BLAST:NP_001165895.1
Original member NCBI NM_001357274.1 NP_001344203.1 Updated not alive Link to Nucleotide Sequence:NM_001357274.1Link to Protein Sequence:NP_001344203.1Re-query CCDS DB by Nucleotide ID:NM_001357274Re-query CCDS DB by Protein ID:NP_001344203
Current member NCBI NM_001357274.2 NP_001344203.1 Accepted alive Link to Nucleotide Sequence:NM_001357274.2Link to Protein Sequence:NP_001344203.1Re-query CCDS DB by Nucleotide ID:NM_001357274Re-query CCDS DB by Protein ID:NP_001344203Link to BLAST:NP_001344203.1

Chromosomal Locations for CCDS 51368.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 144893593 144893709 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 144918651 144918794 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 144919385 144919504 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 144919841 144920079 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 144923906 144924031 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 144927135 144927219 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (831 nt):
ATGGTGTTGCCCCCCAAGCTTCGGGACTTGTCGCGGGAGTCAGTCCTCATCACCGGCGGTGGGAGAGGCA
TCGGACGCCACCTCGCTCGGGAGTTCGCAGAGCGTGGCGCCAGAAAGATTGTTCTCTGGGGGCGGACTGA
AAAATGCCTCAAGGAGACGACAGAGGAGATTCGGCAGATGGGCACAGAGTGCCACTACTTCATCTGTGAC
GTGGGCAACCGGGAAGAGGTGTACCAGATGGCCAAAGCTGTCCGAGAGAAGGTGGGTGACATCACCATCC
TGGTGAACAATGCCGCTGTGGTCCATGGAAAAAGCTTGATGGACAGTGACGATGATGCCCTCCTCAAGTC
CCAGCATGTCAACACCCTGGGCCAATTCTGGACCACCAAGGCCTTTTTGCCACGTATGCTGGAACTCCAG
AACGGCCATATTGTGTGCCTCAATTCCGTGCTTGCACTGTCAGCCATCCCTGGCGCCATCGACTACTGCA
CGTCAAAAGCATCAGCCTTCGCCTTCATGGAGAGCCTGACCTTGGGGCTGTTGGACTGTCCTGGTGTCAG
CGCCACCACCGTTCTGCCCTTTCACACCAGCACCGAGATGTTCCAGGGCATGAGAGTCAGGTTTCCCAAC
CTCTTCCCGCCACTGAAGCCAGAGACAGTAGCCCGGAGGACGGTAGATGCTGTGCAACAAAACCAGGCCC
TTCTCTTGCTCCCGTGGACCATGAATATCCTCATTATCTTGAAAAGCATACTCCCACAAGCTGCACTGGA
GGAGATTCACAGGTTCTCGGGGACTTACACCTGTATGAACACCTTTAAGGGGAGGACATAG

Translation (276 aa):
MVLPPKLRDLSRESVLITGGGRGIGRHLAREFAERGARKIVLWGRTEKCLKETTEEIRQMGTECHYFICD
VGNREEVYQMAKAVREKVGDITILVNNAAVVHGKSLMDSDDDALLKSQHVNTLGQFWTTKAFLPRMLELQ
NGHIVCLNSVLALSAIPGAIDYCTSKASAFAFMESLTLGLLDCPGVSATTVLPFHTSTEMFQGMRVRFPN
LFPPLKPETVARRTVDAVQQNQALLLLPWTMNILIILKSILPQAALEEIHRFSGTYTCMNTFKGRT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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