NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS51437.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
51437.1 Public Mus musculus 5 Prkag2 23 108 98 CCDS HistoryNCBI Gene:108099Re-query CCDS DB by CCDS ID:51437.1Re-query CCDS DB by GeneID:108099See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 51437.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000114975.7 ENSMUSP00000110626.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000114975.7Link to Ensembl Protein Viewer:ENSMUSP00000110626.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000114975Re-query CCDS DB by Protein ID:ENSMUSP00000110626
Original member Current member NCBI NM_001170556.1 NP_001164027.1 Accepted alive Link to Nucleotide Sequence:NM_001170556.1Link to Protein Sequence:NP_001164027.1Re-query CCDS DB by Nucleotide ID:NM_001170556Re-query CCDS DB by Protein ID:NP_001164027Link to BLAST:NP_001164027.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001164027.1 326 Q91WG5-2 326 100% 0 0

Chromosomal Locations for CCDS 51437.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 5 (NC_000071.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 24863856 24863887 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 24866079 24866172 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 24869131 24869277 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 24871055 24871092 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 24871494 24871659 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 24873884 24874010 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 24875161 24875215 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 24876989 24877034 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 24878705 24878763 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 24880684 24880765 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 24889082 24889185 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 24908323 24908353 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (981 nt):
ATGCTGGAGAAGCTGGAGTTCCAGGAGGAAGAAGACTCAGAAAGTGGCGTTTATATGCGATTCATGAGGT
CACACAAGTGTTATGACATCGTTCCAACCAGTTCAAAGCTTGTTGTCTTCGACACTACGTTGCAAGTCAA
AAAGGCCTTCTTTGCCTTGGTAGCCAACGGAGTCCGTGCAGCGCCGCTGTGGGAAAGTAAAAAGCAGAGC
TTTGTAGGAATGCTCACGATTACAGATTTCATAAATATCCTACACAGATACTATAAATCACCCATGGTAC
AGATTTATGAATTGGAAGAACATAAGATTGAAACGTGGAGGGAGTTGTACTTACAAGAAACCTTCAAGCC
TTTGGTGAACATCTCTCCAGATGCGAGCCTCTTCGATGCTGTATACTCGTTGATCAAAAATAAAATCCAC
AGATTGCCAGTTATTGACCCTATCAGTGGGAACGCACTTTATATACTTACCCACAAAAGAATCCTCAAGT
TCCTCCAGCTTTTTATGTCTGACATGCCAAAGCCTGCCTTCATGAAGCAGAACCTGGATGAGCTTGGAAT
CGGAACGTACCACAATATTGCCTTCATTCACCCAGACACTCCCATCATCAAAGCCTTGAACATCTTCGTG
GAGAGACGGATATCCGCATTGCCTGTGGTGGATGAGTCAGGAAAAGTTGTAGATATTTATTCCAAGTTTG
ATGTAATTAATCTTGCTGCTGAGAAAACGTACAATAACTTGGACATCACAGTGACCCAGGCCCTGCAGCA
CCGCTCGCAGTATTTTGAGGGTGTGGTGAAGTGCAGTAAGCTGGAAACACTGGAGACCATCGTGGACAGG
ATAGTGAGAGCCGAGGTCCATCGGCTGGTTGTAGTGAATGAAGCAGATAGCATTGTGGGTATTATCTCCC
TGTCAGACATCCTGCAAGCCCTGATCCTCACACCAGCAGGTGCCAAACAGAAGGAGACAGAGACTGAATG
A

Translation (326 aa):
MLEKLEFQEEEDSESGVYMRFMRSHKCYDIVPTSSKLVVFDTTLQVKKAFFALVANGVRAAPLWESKKQS
FVGMLTITDFINILHRYYKSPMVQIYELEEHKIETWRELYLQETFKPLVNISPDASLFDAVYSLIKNKIH
RLPVIDPISGNALYILTHKRILKFLQLFMSDMPKPAFMKQNLDELGIGTYHNIAFIHPDTPIIKALNIFV
ERRISALPVVDESGKVVDIYSKFDVINLAAEKTYNNLDITVTQALQHRSQYFEGVVKCSKLETLETIVDR
IVRAEVHRLVVVNEADSIVGIISLSDILQALILTPAGAKQKETETE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH