CCDS Report for Consensus CDS

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Report for CCDS51450.1 (current version)

CCDS	Status	Species	Chrom.	Gene	CCDS Release	NCBI Annotation Release	Ensembl Annotation Release	Links
51450.1	Public	Mus musculus	5	Adgrf3	23	108	98

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 51450.1

Original	Current	Source	Nucleotide ID	Protein ID	Status in CCDS	Seq. Status	Links
		EBI	ENSMUST00000088117.10	ENSMUSP00000085440.5	Accepted	alive
		NCBI	NM_001014394.2	NP_001014416.2	Accepted	alive

RefSeq	Length	Related UniProtKB/SwissProt	Length	Identity	Gaps	Mismatches
NP_001014416.2	991	Q58Y75	991	100%	0	0

Chromosomal Locations for CCDS 51450.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 5 (NC_000071.6)

Genome Browser links:

Chromosome	Start	Stop
5	30193537	30193561
5	30195043	30195098
5	30195497	30195559
5	30195650	30195691
5	30196239	30197615
5	30198363	30198539
5	30199017	30199213
5	30199398	30199541
5	30200440	30200646
5	30202239	30202457
5	30202957	30203133
5	30203487	30203627
5	30204341	30204401
5	30205616	30205705

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.

Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2976 nt):
ATGTCCTCTCTAGCTCTCTCCCAGCTGCTCCTGGCCGTGACTCTTCCCCTGCTGGAGTTGGAGCCAACAT TTGTCCCCACAGCCCAATCAGAGCTCAGTCCATATGGAGGGAAATCTGGGCAGCAACTGAACCAGTACAG TGGAGAAGGGGAATCAGTGCTGGTCTCCAGCTATGTGCATCTGGAATTTTCAAGCACAGCCTGGCCACAG GAGCTCTCTAAAAACTTTACTCTTCCTACCGCCCTGGCAGTCCTTCCCCCGAAAACGCTTACTGGCCTTG GCCTTACAACAGAGTGTCGTGCTAACCACAGCGGAACCAGCCTCTGCACTTGCCACCCTGGCTACCAATG GAATGCCACACTTTGTTCCCTTTACCCACACTGCTGGGGCCGCAGGTCAGAAAGAGATTCCTGTATGTGT CGCAGCTTCCACGGTCCTGTTACTGGCTACTGCCAGTTGCTGCCACCTGTTCCTGCAAACCTGATACTGG ACTCCCAGCTGCAAATGCACGGCAACACCCTGAACCTCATTCTCCTCAAGAAAGAGGAAGCCACAAACCT GAGATGGTTCTTGAGACACTCAAAGAACCACACACCCATCAGCCTATGGCCAGGGACCAATGTGTTGCAG ACGTCCAGTGAGGGCCAGTCTGGCCTTCGTGTCGCCCGCATGTCCCGTCATTGGGCAGGTGAGTACGAGA GCATCTTCGAAGCCCAGGGGTTCAGGTGGAGGCTGCGGCAGCTGGTGAAGGTGCCCTTGCAGGAGGAAGA AGTCGTTCGACTCCCAGACGCCCTGTCCATCTCCTGTACTGCCTCCACTGGCTTTCAGCTGAGCTGCTGC ATCCCACTTACAACAGACTACACTGCTACCTGGAGTCCTGGGGAGGACAGCCAAGCCTCCTTGCAAAAAA TGTCGGATTCCCAATGCTTTGTGCTAGCTGTTCCGCACTGCCCAGCAACCAATACCACATACACCTGTAC CCTTCAGAGTCAGAACCTGCCTCCTCTCGTGGCTCCTGTCTCTATCACGATTATCCAGGATGGAGACACT ACCTGCCCTGAGGACTTCTCAGTGGTTAGCTGGAATGTCACCAAGGCTGGCTTCGTGGCACAGGCCCCAT GTCCTGTGAATAAGAAAGGTGTGGTAAAGAGGCTCTGTGGGACTGATGGCATCTGGAGGCCAGTCCAGAA CACCTGCACAGAAGCAAAGATCCTAACCTTGTGTCTTAAAGCCAAGCTGCTGGAAGGCCAGGGAAAGCCC TACGAGGAAGTGCCATGGATCTTGAGTGAGCTGCAAGAGCAGGTGGGCGTGGCCAGCACCCCCTCTGACT TATGGGAAATGCTGCACACTGTGACCTTACTGGCCAAGGTGGTAGCAGAGACAAGCACAGAGCTCACAGG CAGTGCTCTGAAGGACCTCCTGACGACCACAGACAAGATTCTAGACGCGAACATCAGCGCTCTGTGGACT CTGGCCCAGGCCCAGGAGCCCTCCATGGGCTCAGATTTCCTGAAGGCTGTGGAGACCTTGGTTCACAGCT TAAGACCACAACAGCATCCTTTTTCCTTCAGCTCAGCTAATGTGCTACTGCAGAGCCAGCTCCTCAGACA CTCCTCTCCTCCTGGCTACCAAATGTCCTTCTCCACCTGGCCCCTGCTGCAGGCACGGATTCCATGGCAT TCACTGGCCCCACTGGTCCATAGTGGAACTAACGTCAGTATTACTAGCCTAGTACTGCAAAAGCTGGACT ACCGGCTGCCCTCAAACTACACACAAGGGCTGTGGAACACCCCATACACCACCCCTGGGCTGATCCTTGT GGTCTCCATAACAGCAGACGGCCAGGCCTTCACGCAGGCAGAAGTTATCATGGACTATGAAGACATGAAT GGAACCCTTCACTGTGTGTTCTGGGACCACAGGGTCTTCCAGGGTCAGGGAGGTTGGTCAGATGAAGGGT GTGAGGTACATGCAGCCAATGCCAGCATCACTCAGTGCATTTGCCAGCATCTCACAGCCTTTTCCATCCT CATGTCCCAACACACTGTCCCAGAAAATCCCACCCTGGACCTGCTGAGCCAGGTGGGTACGGGGGCTTCC GTCCTGGCTTTGCTCGTCTGCCTGGCTATTTACGGGCTGGTGTGGAGAGTGGTGGTCCGGAACAAAGTCG CCTTCTTCCGCCATACCACCCTGTTTAACATGGTGATCTGCTTGCTGGTCGCAGACACATGCTTCTTGGG AAGCCCCTTCCTTCCTTCAGGCTACCACAGCCTGATCTGCCTAGTCACTGCTTTCCTGTGTCACTTTTTC TACCTGGCCACCTTTTTCTGGATGCTGGCACAGGCCCTGGTGCTGGCCCACCAGCTGCTTTTTGTCTTCC ACCAGCTGTCCAAGCACGTAGTCCTCTCACTGATGGTGATGCTGGGCTACCTGTGCCCACTGGGGTTTGC GGGTGTCACCCTGGGCCTCTACTTGCCTCAAAGGAAATACCTGTGGGAGGGGAAATGCTTTCTGAACGGA GGTGGCGTCATGCTGTACAGCTTCAGTGAGCCAGTGCTGGCCATCGTCGGTGTCAACGGGCTGGTCCTTG TCATCGCTGTGCTGAAGCTGCTGCGACCTTCACTGTCAGAGGGGCCCACAGTGGAGAAGCGCCAAGCTCT TGTGGGGGTGCTTAAAGCCCTGCTTATTCTCACACCCATCTTTGGCCTCACTTGGGGACTGGGCGTGGCC ACTCTGTTTGATGGCTCCATAGTCTCTCACTACGCCTTTTCCATTCTCAACAGCCTCCAGGGTGTCTTCA TATTAGTGTTTGGCTGCCTCACAGACAAGAAGGTACTAGAGGCCTTGCGCAAACGATTGCGAGGCAGCCG GTCCTCTAACTCTGCCATCTCCATGGTCACAAATGAAACCTATACCTCAGAACACAGCAAAGAAAGAAGT GAGCCTGCCAGTTATGAAGAAAGGATGACTGATTGA
Translation (991 aa):
MSSLALSQLLLAVTLPLLELEPTFVPTAQSELSPYGGKSGQQLNQYSGEGESVLVSSYVHLEFSSTAWPQ ELSKNFTLPTALAVLPPKTLTGLGLTTECRANHSGTSLCTCHPGYQWNATLCSLYPHCWGRRSERDSCMC RSFHGPVTGYCQLLPPVPANLILDSQLQMHGNTLNLILLKKEEATNLRWFLRHSKNHTPISLWPGTNVLQ TSSEGQSGLRVARMSRHWAGEYESIFEAQGFRWRLRQLVKVPLQEEEVVRLPDALSISCTASTGFQLSCC IPLTTDYTATWSPGEDSQASLQKMSDSQCFVLAVPHCPATNTTYTCTLQSQNLPPLVAPVSITIIQDGDT TCPEDFSVVSWNVTKAGFVAQAPCPVNKKGVVKRLCGTDGIWRPVQNTCTEAKILTLCLKAKLLEGQGKP YEEVPWILSELQEQVGVASTPSDLWEMLHTVTLLAKVVAETSTELTGSALKDLLTTTDKILDANISALWT LAQAQEPSMGSDFLKAVETLVHSLRPQQHPFSFSSANVLLQSQLLRHSSPPGYQMSFSTWPLLQARIPWH SLAPLVHSGTNVSITSLVLQKLDYRLPSNYTQGLWNTPYTTPGLILVVSITADGQAFTQAEVIMDYEDMN GTLHCVFWDHRVFQGQGGWSDEGCEVHAANASITQCICQHLTAFSILMSQHTVPENPTLDLLSQVGTGAS VLALLVCLAIYGLVWRVVVRNKVAFFRHTTLFNMVICLLVADTCFLGSPFLPSGYHSLICLVTAFLCHFF YLATFFWMLAQALVLAHQLLFVFHQLSKHVVLSLMVMLGYLCPLGFAGVTLGLYLPQRKYLWEGKCFLNG GGVMLYSFSEPVLAIVGVNGLVLVIAVLKLLRPSLSEGPTVEKRQALVGVLKALLILTPIFGLTWGLGVA TLFDGSIVSHYAFSILNSLQGVFILVFGCLTDKKVLEALRKRLRGSRSSNSAISMVTNETYTSEHSKERS EPASYEERMTD

	Links Key
	Links to:	History report BLAST report Entrez Gene Nucleotide report Protein report
	Re-query CCDS DB by:	CCDS ID Gene ID Nucleotide ID Protein ID
	Genome Browser Links:	Ensembl Genome Browser NCBI Sequence Viewer UCSC Genome Browser VEGA Genome Browser

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