NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS52029.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
52029.1 Public Mus musculus 7 Sult2a5 23 108 98 CCDS HistoryNCBI Gene:434264Re-query CCDS DB by CCDS ID:52029.1Re-query CCDS DB by GeneID:434264See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 52029.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000108525.3 ENSMUSP00000104165.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000108525.3Link to Ensembl Protein Viewer:ENSMUSP00000104165.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000108525Re-query CCDS DB by Protein ID:ENSMUSP00000104165
Original member Current member NCBI NM_001184980.1 NP_001171909.1 Accepted alive Link to Nucleotide Sequence:NM_001184980.1Link to Protein Sequence:NP_001171909.1Re-query CCDS DB by Nucleotide ID:NM_001184980Re-query CCDS DB by Protein ID:NP_001171909Link to BLAST:NP_001171909.1

Chromosomal Locations for CCDS 52029.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 13624045 13624180 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 13625237 13625445 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 13628715 13628841 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 13662462 13662556 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 13665037 13665214 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 13670585 13670697 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (858 nt):
ATGATGTCAGACTATAATTGGTTTGAAGGCATACCTTTTCCTGCCATATCATATCAAAGAGAAATTTTGG
AAGATATTCGTAATAGGTTTGTGGTGAAAGAAGAAGACTTGTTGATATTGACTTACCCCAAGTCAGGAAC
AAACTGGTTGGTTGAGATTGTCTGCTTGATTCAGACCAAGGGAGATCCGAAGTGGATCCAAACTGTGCCC
AATTGGGACCGCTCACCCTGGATAGAGACTGATATAGGATATCCTGCATTAATCAATAAAGAGGGACCAC
GACTCATATCCTCCCATCTTCCCATTCATCTCTTCTCCAAGTCTTTCTTCAGTTCCAAGGCCAAGGCAAT
CTATCTCATCAGAAATCCCAGAGATATTCTTGTGTCTGGATACTTTTTCTATGGTAACACAAACATTGTG
AAGAATCCAGGGTCTTTTGGAACTTATTTTGAATGGTTCCTCAAAGGAAATGTCATATATGGATCATGGT
TTGAGCATGTCCGTGGCTGGCTGTCCATGAGAGAATGGGACAACTTCTTGGTACTATACTATGAAGACTT
GAAAAAGGATCCAAAGGGAACCATAAAAAAGATCTGTGACTTCCTAGGGAAAAATTTAGGGCCAGATGAG
CTGGATCTTGTCTTCAAATACAGCTCCTTCCAAGCCATGAAAGAAAACAACATGTCCAATTTTAGTCTCA
TTACGGAAGATCGGGTTACTAATGGCTTGAAGCTCATGAGAAAAGGTACAACTGGGGACTGGAAGAATCA
CTTCACAGTAGCCCAAGCTGAAGCCTTCGATAAAGTTTTCCAGGAGAAAATGGCCGGATTCCCCCCAGGG
ATGTTCCCATGGGAATAA

Translation (285 aa):
MMSDYNWFEGIPFPAISYQREILEDIRNRFVVKEEDLLILTYPKSGTNWLVEIVCLIQTKGDPKWIQTVP
NWDRSPWIETDIGYPALINKEGPRLISSHLPIHLFSKSFFSSKAKAIYLIRNPRDILVSGYFFYGNTNIV
KNPGSFGTYFEWFLKGNVIYGSWFEHVRGWLSMREWDNFLVLYYEDLKKDPKGTIKKICDFLGKNLGPDE
LDLVFKYSSFQAMKENNMSNFSLITEDRVTNGLKLMRKGTTGDWKNHFTVAQAEAFDKVFQEKMAGFPPG
MFPWE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH