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Report for CCDS52431.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
52431.1 Public Mus musculus 7 Zfp511 23 108 98 CCDS HistoryNCBI Gene:69752Re-query CCDS DB by CCDS ID:52431.1Re-query CCDS DB by GeneID:69752See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 52431.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000168194.2 ENSMUSP00000129154.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000168194.2Link to Ensembl Protein Viewer:ENSMUSP00000129154.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000168194Re-query CCDS DB by Protein ID:ENSMUSP00000129154
Original member NCBI NM_027201.1 NP_081477.1 Updated not alive Link to Nucleotide Sequence:NM_027201.1Link to Protein Sequence:NP_081477.1Re-query CCDS DB by Nucleotide ID:NM_027201Re-query CCDS DB by Protein ID:NP_081477
Current member NCBI NM_027201.2 NP_081477.1 Accepted alive Link to Nucleotide Sequence:NM_027201.2Link to Protein Sequence:NP_081477.1Re-query CCDS DB by Nucleotide ID:NM_027201Re-query CCDS DB by Protein ID:NP_081477Link to BLAST:NP_081477.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_081477.1 250 Q6P0X2-2 250 100% 0 0

Chromosomal Locations for CCDS 52431.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 140036454 140036606 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 140036820 140036893 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 140037220 140037421 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 140037516 140037640 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 140039326 140039445 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 140040243 140040321 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (753 nt):
ATGTTGCTTCCCCCTGCACTATATTCCCGCCTGGCCGGGGAGCCGGGGGCAGCCGAACCGCTGCCCGTGG
AGAGGAACCCTGCGGCTGGGGAGGCACCCTTCCGATTCGCGCCGCGTGCCGTGCGCTTCCCGCGGGATCA
CGAATTCTTCGAGGATGGGGATGTGCAGCGGCACCTGTACTTGCAGGACATGCTCACGCAAGTGTCCGAG
ACGCCGGAAAAATCCATGGTGCCTGAGTTCACCTGTCAGGTGGCTGGCTGTTGCCAAGTGTTTGCCGCCA
TAGAAGACTACCAGCACCACTACCACATGATGCATGGAAACACCTGCTCCTTCTGCAACCGTGCCTTCCC
CTCTGGGCATTTGCTGGATGTCCACATCCTGGAATGGCACGACTCTCTGTTTCAGATCCTGGCCCAGAGG
CAAGACATGTACCAGTGCTTGGTTGAAAGCTGCCCAGAGAAGTTCAAGACCAGCCAAGACCGGAAGGATC
ACATGGTGAGGCTACACCTGTACCCTGCGGATTTCCGATTTGATAAGCCCAAGACGAACAGAGGCCCAGC
CATGCCAGCTGCAGCAGACGCAGCAACCAGAGCCCCAACAGATGACAGTGACGCCATGGAGATCTGCTCT
GAGCCCGCTGCCCCACCTCCCTGCAGGCGGACCTACAGTCACAGAATACCTTCCACTGTCTGTTTTGGCC
AGGGTGCAGCCAGAGGGTTTAAAAGCACCAAGAAAAAAAACAAACACCACTGA

Translation (250 aa):
MLLPPALYSRLAGEPGAAEPLPVERNPAAGEAPFRFAPRAVRFPRDHEFFEDGDVQRHLYLQDMLTQVSE
TPEKSMVPEFTCQVAGCCQVFAAIEDYQHHYHMMHGNTCSFCNRAFPSGHLLDVHILEWHDSLFQILAQR
QDMYQCLVESCPEKFKTSQDRKDHMVRLHLYPADFRFDKPKTNRGPAMPAAADAATRAPTDDSDAMEICS
EPAAPPPCRRTYSHRIPSTVCFGQGAARGFKSTKKKNKHH


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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