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Report for CCDS52551.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
52551.1 Public Mus musculus 8 Wdr17 23 108 98 CCDS HistoryNCBI Gene:244484Re-query CCDS DB by CCDS ID:52551.1Re-query CCDS DB by GeneID:244484See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 52551.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000150488.7 ENSMUSP00000122326.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000150488.7Link to Ensembl Protein Viewer:ENSMUSP00000122326.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000150488Re-query CCDS DB by Protein ID:ENSMUSP00000122326
Original member NCBI NM_001172152.1 NP_001165623.1 Updated not alive Link to Nucleotide Sequence:NM_001172152.1Link to Protein Sequence:NP_001165623.1Re-query CCDS DB by Nucleotide ID:NM_001172152Re-query CCDS DB by Protein ID:NP_001165623
Current member NCBI NM_001172152.2 NP_001165623.1 Accepted alive Link to Nucleotide Sequence:NM_001172152.2Link to Protein Sequence:NP_001165623.1Re-query CCDS DB by Nucleotide ID:NM_001172152Re-query CCDS DB by Protein ID:NP_001165623Link to BLAST:NP_001165623.1

Chromosomal Locations for CCDS 52551.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 54629791 54629910 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 54632313 54632496 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 54635445 54635543 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 54638287 54638388 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 54639401 54639503 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 54639836 54639977 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 54643114 54643225 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 54645338 54645358 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 54648220 54648359 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 54649133 54649232 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 54651287 54651378 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 54653879 54654011 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 54657195 54657259 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 54659584 54659739 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 54660772 54660897 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 54661216 54661346 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 54661433 54661582 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 54662849 54663051 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 54664966 54665130 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 54668349 54668435 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 54670301 54670383 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 54672485 54672576 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 54673530 54673698 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 54681346 54681530 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 54685396 54685518 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 54687526 54687777 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 54690004 54690234 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 54693057 54693240 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 54696269 54696391 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3873 nt):
ATGTCCCAGGTCAGGCAAGTGGGACTTCTGGCTGCTGGATGTCAACCATGGAACAAAGATGTATGTGCTG
CCAACGGAGATCGGTTTGCATACTGCGCAACTCTGGCCATCTACATATACCAGCTGGATCACCGTTATAA
TGAATTCAAACTTCATGCAATTATGTCGGAACATAAAAAAACAATCACGGCAATTTCCTGGTGTCCACAT
AACCCTGACCTGTTTGCAAGCAGCAGTACCGATAACTTAGTGATCATTTGGAACGTGGCTGAGCAAAAAG
TCATTGCTAAACTCGACAACATCAAAGAGACACCTGCCTGCCTCGGCTGGTGCTGGAACACACATGATGC
TGTGGCATTCGTTTCCCAGAAGGGTCCTCTGCTCATTTGGACCATCTCAGGGCCAGATAGTGGAGTGTCT
GTGCACAAAGAAGCCCATAGTTTTGCGTCTGACATTTGCATATTTAGGTGGCACACCCAAAAGAAAGGAA
AAGTTGCATTTGGTCACATTGATGGAAGCATATCGATTTTTCAGCCTGGTAGCAAAAATCAGAAACATGT
TCTGAGACCGGACTCTCTTGAAGGAACAGATGAGGAGGACCCTGTTACAGCCCTGGAGTGGGACCCACTG
TCCACAGATTATCTTCTGGTGGCTAATTTGCATTTTGGAATTCGTCTTCTGGACTCTGAATCCCTTTACT
GCATCACAACGTTTAATCTTCCCAGTGCTGCAGTGTCTGTGCAGTGCTTGGCCTGGGTTCCCAGTGCTCC
AGGCATGTTTATAACTGGAGATTCTCAAGTGGGCGTTTTACGCATTTGGAATGTTTCAAGAACAACACCT
ATTGATAATTTTAAATTAAAGAAAACAGGATTTCACTGCTTTCATGTAGTTAATTCTCCTCCAAAGAAAA
AATTTTCCGTCCAGTCTCCAAACAAAAATCATTATATATCTTCAACAAGTGAAGCAGTTCCACCCCCAAA
TTTGACACAGAATCAAGCATTTTCTCTTCCCCCTGGTCATGTCGTATGCTGTTTCCTGGATGGTGGAGTT
GGACTTTATGACATGGGAGCCAAGAAGTGGGATTTTCTTAGAGAACTGGGACACGTGGAAACTATATTTG
ACTGCAAATTCAAACCTGATGATCCAAATGTTTTAGCAACAGCTTCATTTGATGGCACTATAAAGGTGTG
GGATATAAACACATTAACAGCAGTGTATACCTCTCCGGGTAACGAAGGGGTCATTTTTGCTCTTTCTTGG
GCTCCAGGTGATTTAAATTGCATTGCTGGTGCAACTTCCAGAAATGGCGCTTTTATTTGGGATATTCAAA
AGGGCAAAATAATACAGCGATTTAATGAGCATGGAAAAAATGGAATATTCTATATTGCCTGGAGTCATAA
AGATTCTAAACGAATAGCAACTTGCAGTGGCGATGGTTTTTGCATTATTCGAACAGTCGATGGTAAACTA
CTGCACAAATACAAACACCCGGCTGCAGTGTTTGGCTGTGATTGGAGCCAAAACAACAAAGACATGATAG
CCACTGGCTGTGAAGACAAAAACATCCGTGTCTTTTATGTAGCCACGAGCTCTAATCAGCCCTTGAAAGT
GTTTAGCGGGCACACAGCAAGAGTGTTCCATGTTAAGTGGTCTCCTCTGAGGGAAGGAATTCTCTGCAGT
GGTTCTGATGATGGCTCTGTTCGAATCTGGGATTATACTCAAGATGCTTGCGTAAGCACTCTTAATGGAC
ACACTGCACCTGTGAGGGGGTTAATGTGGAATACTGAGATTCCATACCTACTAATCTCTGGAAGCTGGGA
CTATACTATCAAAGTGTGGGATACTCGAGGAGGAGTTTGCCTAGATACTGTGTATGATCACGGTGCAGAC
GTTTATGGTTTAACTTGCCATCCAAGTCGTCCCTTCACGATGGCTTCCTGCTCCCGAGATTCTACAGTGA
GACTCTGGTCATTAATACCTTTAATCACCCCTTTACAAATAAATATTCTGGCAGACAGATCTTGGGACGA
AGTTATCGGAAACACTGATAATGCGATACGTCAAGACTGTCCTCCTCTCCTCTGCGGCAAAGTGTCAAGA
GACATTAAACAAGAAGTAGAAAAACTAACGTGCAACCCTCGGGCGAAAAAGCTAAGACTGTTTTCAGAAT
GTTTATCACCTCCAGGTGGCAGTGACAACTTGTGGAACTTGGTGTCCGTGATTAAAGGACAAGATGACAG
CTTGCTCCCTCAGAACTACTGCAAAGGAATGATGCATTTGAAACACCTGATCAAATTTAGAACCTCAGAA
GCCCAAGAACTAACGACAATCAAGATGTCTAAATTTGGTGGTGGTGTTGGCGCACCTACTAAGGAGAAAA
AACTGAAGGAAGCTGCTGAAATCCACCTGAGATTAGGACAAATACAGAGATACTGTGAACTCATGGTCGA
ACTTGGAGAGTGGGACAAAGCCCTATCAGTTGCACCTGGGGTCTCTGTGAAATACTGGAGAAAGTTAATG
CAGAGGAGAGCTGACCAGTTAATTCAGGAAGATAAGGATGATGTCATTCCATACTGTATAGCCACTGGGG
ATGTGAAAAAGCTCGTCAATTTTTTTGTGTCCAGGGGTCAGCTTAAAGAAGCACTGCTTGTTGCACAGGC
TGCCTGTGAGGGAAATATGCAAAATGCCCATGTTTCTACACCAAAAGGAGCTTCAAACTCTGATGATATC
CACAAAGAAGACTTTAATGAACTCTTACACAAAGTCATAAATGAGCTGGCCGAATGGTATTTTCAGGATG
GCCAAGCTGTGTTGGCTGCGTGCTGCCATCTTGCTGTAGATGATATTGAGCTTGCTATGGCATACCTGAT
CCGTGGGAATGAACTAGAGCTGGCGGTCTCAGTGGGCACTGTCCTAGGAGAACCCGCAGCCCCAGCAATG
CATTATGCCCTGCAGCTACTGGCGACAAAATGCATGATGATTCCAATGTGCTTCCCATCTGTTGTATACA
GGAACCTGGCAGCTGATCTTCTCCTGATGACTCCTGGTAGCGAAGTCCACTTAGTAAAACTCTGTGCCTT
CTACCCTGGGTGCATCGAAGAAATCAATGACCTTCACAAGAAGTGCAATCTACCCCCTGCAGAAGAATGC
ACTCAGTTGGCTGAAACAGCCCGGGCAGATGGCAATGTATTTGAAACCATAAAGTATTATTTACTAAGTC
AAGAACCTGAAAAGGCTCTTCCTATTGGTATTGACTTTGTCAAAGGATGTATCAGTAACTCAAACTGGAC
TCTAGATACTGTTTACCCTGTGCTTGACCTGATGAGTTATATCCGTACTGAAAAATTACTCTTACATACG
TGCACTGAGGCTCGAAATGAATTGCTTATCTTATGTGGTTACATCGGTGCCTTGCTGGCTATCAGGAGAC
AGTATCAAAGCATTGTTCCCTCGCTGTATGAGTACACGAGTCAGCTCTTAAAACGACGAGTGGTGTCAGT
ACCATTAAAAATTGAGCATCTCTCTGAGGAGCTGGATGCATGGAGAGCTTGCACACAATCGACCAAACAA
TCATCAGAAGATTCTCCATATACACCCCCTTCTGACTCACAAAGAACAGTTTATGAAACTTTATTAAAGA
GACTGAAAGAAGAGCCACTCAAAGGAATTACTGGACTAGATTACGTGACTGGATCAAATCTTCCAAGCCA
TTCAGACATTCACATCTCTTGTCTTACTGGACTAAAAATCCAGGGTCCTGTGTATTTCCTAGAAGATGGA
AAATCAACTATTTCTTTGAATGACGCTCTGATGTGGGCAAAGGTGAATCCATTCTCACCTTTAGGAACTG
GAATACGACTCAATCCATTTTGA

Translation (1290 aa):
MSQVRQVGLLAAGCQPWNKDVCAANGDRFAYCATLAIYIYQLDHRYNEFKLHAIMSEHKKTITAISWCPH
NPDLFASSSTDNLVIIWNVAEQKVIAKLDNIKETPACLGWCWNTHDAVAFVSQKGPLLIWTISGPDSGVS
VHKEAHSFASDICIFRWHTQKKGKVAFGHIDGSISIFQPGSKNQKHVLRPDSLEGTDEEDPVTALEWDPL
STDYLLVANLHFGIRLLDSESLYCITTFNLPSAAVSVQCLAWVPSAPGMFITGDSQVGVLRIWNVSRTTP
IDNFKLKKTGFHCFHVVNSPPKKKFSVQSPNKNHYISSTSEAVPPPNLTQNQAFSLPPGHVVCCFLDGGV
GLYDMGAKKWDFLRELGHVETIFDCKFKPDDPNVLATASFDGTIKVWDINTLTAVYTSPGNEGVIFALSW
APGDLNCIAGATSRNGAFIWDIQKGKIIQRFNEHGKNGIFYIAWSHKDSKRIATCSGDGFCIIRTVDGKL
LHKYKHPAAVFGCDWSQNNKDMIATGCEDKNIRVFYVATSSNQPLKVFSGHTARVFHVKWSPLREGILCS
GSDDGSVRIWDYTQDACVSTLNGHTAPVRGLMWNTEIPYLLISGSWDYTIKVWDTRGGVCLDTVYDHGAD
VYGLTCHPSRPFTMASCSRDSTVRLWSLIPLITPLQINILADRSWDEVIGNTDNAIRQDCPPLLCGKVSR
DIKQEVEKLTCNPRAKKLRLFSECLSPPGGSDNLWNLVSVIKGQDDSLLPQNYCKGMMHLKHLIKFRTSE
AQELTTIKMSKFGGGVGAPTKEKKLKEAAEIHLRLGQIQRYCELMVELGEWDKALSVAPGVSVKYWRKLM
QRRADQLIQEDKDDVIPYCIATGDVKKLVNFFVSRGQLKEALLVAQAACEGNMQNAHVSTPKGASNSDDI
HKEDFNELLHKVINELAEWYFQDGQAVLAACCHLAVDDIELAMAYLIRGNELELAVSVGTVLGEPAAPAM
HYALQLLATKCMMIPMCFPSVVYRNLAADLLLMTPGSEVHLVKLCAFYPGCIEEINDLHKKCNLPPAEEC
TQLAETARADGNVFETIKYYLLSQEPEKALPIGIDFVKGCISNSNWTLDTVYPVLDLMSYIRTEKLLLHT
CTEARNELLILCGYIGALLAIRRQYQSIVPSLYEYTSQLLKRRVVSVPLKIEHLSEELDAWRACTQSTKQ
SSEDSPYTPPSDSQRTVYETLLKRLKEEPLKGITGLDYVTGSNLPSHSDIHISCLTGLKIQGPVYFLEDG
KSTISLNDALMWAKVNPFSPLGTGIRLNPF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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