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Report for CCDS52595.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
52595.1 Public Mus musculus 8 Fam32a 23 108 98 CCDS HistoryNCBI Gene:67922Re-query CCDS DB by CCDS ID:52595.1Re-query CCDS DB by GeneID:67922See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 52595.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000003123.9 ENSMUSP00000003123.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000003123.9Link to Ensembl Protein Viewer:ENSMUSP00000003123.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000003123Re-query CCDS DB by Protein ID:ENSMUSP00000003123
Original member Current member NCBI NM_026455.5 NP_080731.1 Accepted alive Link to Nucleotide Sequence:NM_026455.5Link to Protein Sequence:NP_080731.1Re-query CCDS DB by Nucleotide ID:NM_026455Re-query CCDS DB by Protein ID:NP_080731Link to BLAST:NP_080731.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_080731.1 112 Q9CR80 112 100% 0 0

Chromosomal Locations for CCDS 52595.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 72219787 72219860 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 72219941 72220082 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 72221928 72221981 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 72222182 72222250 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (339 nt):
ATGGAGGCCTACGAGCAAGTCCAGAAGGGCCCCCTGAAGCTGAAAGGCGTGGCAGAGCTCGGCGTGACAA
AGCGGAAGAAGAAGAAGAAAGACAAAGACAAGGCCAAGATGCTGGAGGCCATGGGGACGAGCAAGAAGAG
CGAGGAGGAGAAAAGGCGCTGCCTGGACAAGCGCACGCCGGCGCAGGCAGCCTTCGAAAAGATGCAGGAG
AAGCGGCAAATGGAAAGAATCCTGAAGAAGGCATCAAAAACCCACAAACAGAGAGTGGAGGACTTCAACC
GACACCTGGATACACTCACTGAGCACTATGACATTCCCAAAGTCAGCTGGACCAAGTAA

Translation (112 aa):
MEAYEQVQKGPLKLKGVAELGVTKRKKKKKDKDKAKMLEAMGTSKKSEEEKRRCLDKRTPAQAAFEKMQE
KRQMERILKKASKTHKQRVEDFNRHLDTLTEHYDIPKVSWTK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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