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Report for CCDS52732.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
52732.1 Public Mus musculus 9 Zfp266 23 108 98 CCDS HistoryNCBI Gene:77519Re-query CCDS DB by CCDS ID:52732.1Re-query CCDS DB by GeneID:77519See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 52732.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000068296.7 ENSMUSP00000066012.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000068296.7Link to Ensembl Protein Viewer:ENSMUSP00000066012.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000068296Re-query CCDS DB by Protein ID:ENSMUSP00000066012
Original member Current member EBI ENSMUST00000174462.7 ENSMUSP00000134217.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000174462.7Link to Ensembl Protein Viewer:ENSMUSP00000134217.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000174462Re-query CCDS DB by Protein ID:ENSMUSP00000134217
Original member Current member NCBI NM_001082485.1 NP_001075954.1 Accepted alive Link to Nucleotide Sequence:NM_001082485.1Link to Protein Sequence:NP_001075954.1Re-query CCDS DB by Nucleotide ID:NM_001082485Re-query CCDS DB by Protein ID:NP_001075954Link to BLAST:NP_001075954.1
Original member Current member NCBI NM_001135019.1 NP_001128491.1 Accepted alive Link to Nucleotide Sequence:NM_001135019.1Link to Protein Sequence:NP_001128491.1Re-query CCDS DB by Nucleotide ID:NM_001135019Re-query CCDS DB by Protein ID:NP_001128491Link to BLAST:NP_001128491.1

Chromosomal Locations for CCDS 52732.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 20499065 20500477 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 20500874 20500953 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 20502041 20502121 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 20505052 20505178 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 20505977 20506065 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 20506728 20506752 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1815 nt):
ATGGCAGCCATTGATTTGTCCCATGGCCTTCTTTCTAGAGAGCCTATCTACGTCTACGAAGCAAACATAG
AGGTAGACGGGACGGTGACTGACAACCAGGCAAATTGTTACCAGGATTCAGTGACCTTCGATGATGTGGC
TGTGGAGTTCACCCCGGATGAGTGGACTTTACTGGACCTGACTCAGAAGAATCTATACCGAGAGGTCATG
CTGGAGAACTACGAGAACTTGACTTCAGTAGGATGTCAGTTATTCATTCCTAGTCTGACCCCCTGGTTAA
AACAAGAAGAGTCCGAGGTGGCGGAAAGTGCTGTTCCTCAACAATTGGAACTACAACCTACAATTGACGA
TTCAGAGCTTGAGAATTATTTTAGGATGCAAAGTTCCAGTGCAACAGAAATGGTGGGTGACTCATCTCTT
CACGAGCAGTCAGGAAACCACAATGAAGAGGACCTATGTGACTCTAAGCCATGTGGGAATGTGTTGGGTG
AACAATTATGCCTTAACACAGAGGTGAGCATGCAAAGTCAAGGATACAGTTCTGAGTGTAACTGGTATGG
GAAAGACATTCTTTCTTTGCTCAAGGAAACCTCTACTGGACAGACCGTTTCTGAGCTTAATCAGTGTGGA
AAACTCTTCAGTCTGACTCCAAACATCATGTACCCGAGCACTAGCACAAATGAGAAGCCCTTTGAATGCA
CAGACTGTGAGACAGCCTTTTTTAATCAGTCTTACTTTCAGCCAGATATGAGGCCTCACAATGGAGGAGA
ACCCTTTGACTGGAGTAAATACGGGAATGGTTTTATTCATCCTACAGGCCTTGCTATGCATCTTCCAATT
CTCAATGCAAGAAACCCCTACAAATTTGAGGAATGTGGAAAGGACTTTCAGTATTTTGCATGCCTTAATA
ATCCCATGGGAATGTGCACTGGAGAAAAATTCTGTGACTGCAAGGAATGTTGGAAAGCCTTCACGGTTTC
CTCACACCTAACTCAATATGTATCAATTCATACTGAAGAAAAATCCAAAGTATGTAAGATATGTGGGAAG
TCCTTTGCTAACTATTCTCGACTTTCTGCACATGTAAAAACTCATAATGAAGAAAAGCCCTTTGTATGTA
AGGAGTGTGGAAAGGCCTTTAAAAATATGTCATACCTTAATGATCACGTTAGAATTCACACTGGAATAAA
ATCATACAAATGTATGGAATGTGGGAAAGCCTTCCTTCGATGGTCAGGCCTTACTGAACACATAAGAGTT
CACACTGGGGAAAAGCCTTACGAATGTAAGGAATGTGGAAAAACCTTTTCTAGATCTACTCAGCTTACTG
AACACATAAGAACACACACTGGAATCAAACCTTATGAATGTAAGGAATGTGGGAAAGCCTTTACTCAGTA
CTCGGGCCTTGCCACCCATGTACGAATTCATAGTGGAGAAAAGCCCTTTGCTTGTAAGGAGTGTGGGAAG
GCCTTTACCAGGACCTCTGGCCTGATTCATCATGTGAGAACTCACACAGGAGAGAAGCCTTTTGAATGTG
TTCATTGTGGGAAAACCTTCATTACTTCCTCCCATCGCACTAAACATCTGAAAATTCACAGTGGCGAAAA
GCCCTTTGTGTGTAACATATGTGGGAAAGCATTTATATATTCTACATCCCTTAACATTCACATGCGAACC
CACACTGGAGAGAAGCCCTATATATGTAAGCAGTGTGGGAAAGCCTTCGCTGTTTACTCACGACTGAGGA
AACACAGCAGAGTTCACACTGAGGAGAAGCCCTATCAATGTGAGGGTATGGCCGTTGCTATTTAG

Translation (604 aa):
MAAIDLSHGLLSREPIYVYEANIEVDGTVTDNQANCYQDSVTFDDVAVEFTPDEWTLLDLTQKNLYREVM
LENYENLTSVGCQLFIPSLTPWLKQEESEVAESAVPQQLELQPTIDDSELENYFRMQSSSATEMVGDSSL
HEQSGNHNEEDLCDSKPCGNVLGEQLCLNTEVSMQSQGYSSECNWYGKDILSLLKETSTGQTVSELNQCG
KLFSLTPNIMYPSTSTNEKPFECTDCETAFFNQSYFQPDMRPHNGGEPFDWSKYGNGFIHPTGLAMHLPI
LNARNPYKFEECGKDFQYFACLNNPMGMCTGEKFCDCKECWKAFTVSSHLTQYVSIHTEEKSKVCKICGK
SFANYSRLSAHVKTHNEEKPFVCKECGKAFKNMSYLNDHVRIHTGIKSYKCMECGKAFLRWSGLTEHIRV
HTGEKPYECKECGKTFSRSTQLTEHIRTHTGIKPYECKECGKAFTQYSGLATHVRIHSGEKPFACKECGK
AFTRTSGLIHHVRTHTGEKPFECVHCGKTFITSSHRTKHLKIHSGEKPFVCNICGKAFIYSTSLNIHMRT
HTGEKPYICKQCGKAFAVYSRLRKHSRVHTEEKPYQCEGMAVAI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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