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Report for CCDS53372.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
53372.1 Public Homo sapiens 1 FLAD1 24 110 108 CCDS HistoryNCBI Gene:80308Re-query CCDS DB by CCDS ID:53372.1Re-query CCDS DB by GeneID:80308See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 53372.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000368431.7 ENSP00000357416.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000368431.7Link to Ensembl Protein Viewer:ENSP00000357416.3Re-query CCDS DB by Nucleotide ID:ENST00000368431Re-query CCDS DB by Protein ID:ENSP00000357416
Original member Current member NCBI NM_001184892.2 NP_001171821.1 Accepted alive Link to Nucleotide Sequence:NM_001184892.2Link to Protein Sequence:NP_001171821.1Re-query CCDS DB by Nucleotide ID:NM_001184892Re-query CCDS DB by Protein ID:NP_001171821Link to BLAST:NP_001171821.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001171821.1 294 Q8NFF5-4 294 100% 0 0

Chromosomal Locations for CCDS 53372.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 154988030 154988914 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (885 nt):
ATGCAGCCATCATCTTCAACCCCTCCCCTTCATCCCTACAGTACTGATGGCCTCATCTTCCCCTTCAACC
CCCAGGGACACACTCAGGACACCAACACCTTCTTTCTGTGCCGGACACTGCGCTCCCTAGGGGTCCAGGT
TTGCCGAGTCTCAGTTGTACCTGATGAGGTAGCCACCATTGCAGCTGAGGTCACTTCTTTCTCCAACCGC
TTCACCCATGTCCTCACAGCAGGGGGCATCGGCCCCACTCATGATGATGTGACCTTTGAGGCAGTGGCAC
AGGCCTTTGGAGATGAGCTGAAGCCACACCCCAAGTTGGAAGCAGCCACCAAAGCCCTAGGAGGGGAAGG
CTGGGAGAAGCTATCATTGGTGCCCTCCTCTGCCCGCCTGCATTATGGCACAGATCCTTGCACTGGTCAA
CCTTTCAGATTCCCTCTGGTCTCCGTCCGAAACGTCTACCTCTTCCCAGGCATTCCAGAGCTGCTGCGGC
GGGTGCTGGAGGGGATGAAGGGACTATTCCAAAACCCAGCTGTTCAGTTCCACTCAAAGGAGCTATATGT
GGCTGCTGATGAAGCCTCCATCGCCCCCATTCTGGCTGAGGCCCAGGCCCACTTTGGACGTAGGCTTGGC
CTGGGTTCCTACCCTGACTGGGGCAGCAACTACTATCAGGTGAAGCTGACTCTAGACTCAGAGGAAGAAG
GACCCCTGGAGGAATGCTTGGCCTACCTGACTGCCCGTTTGCCCCAGGGATCGCTGGTCCCCTACATGCC
CAACGCTGTGGAGCAGGCCAGTGAGGCTGTATACAAACTCGCTGAATCAGGTAGGGACCTTATGGAGGAG
GGGCATTATGCCCAAAGCCATTGGTGGCACCCCAGATCTCAGTAA

Translation (294 aa):
MQPSSSTPPLHPYSTDGLIFPFNPQGHTQDTNTFFLCRTLRSLGVQVCRVSVVPDEVATIAAEVTSFSNR
FTHVLTAGGIGPTHDDVTFEAVAQAFGDELKPHPKLEAATKALGGEGWEKLSLVPSSARLHYGTDPCTGQ
PFRFPLVSVRNVYLFPGIPELLRRVLEGMKGLFQNPAVQFHSKELYVAADEASIAPILAEAQAHFGRRLG
LGSYPDWGSNYYQVKLTLDSEEEGPLEECLAYLTARLPQGSLVPYMPNAVEQASEAVYKLAESGRDLMEE
GHYAQSHWWHPRSQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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