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Report for CCDS53391.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
53391.1 Public Homo sapiens 1 OR6P1 24 110 108 CCDS HistoryNCBI Gene:128366Re-query CCDS DB by CCDS ID:53391.1Re-query CCDS DB by GeneID:128366See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 53391.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000641540.1 ENSP00000492936.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000641540.1Link to Ensembl Protein Viewer:ENSP00000492936.1Re-query CCDS DB by Nucleotide ID:ENST00000641540Re-query CCDS DB by Protein ID:ENSP00000492936
Original member Current member NCBI NM_001160325.2 NP_001153797.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001160325.2Link to Protein Sequence:NP_001153797.1Re-query CCDS DB by Nucleotide ID:NM_001160325Re-query CCDS DB by Protein ID:NP_001153797Link to BLAST:NP_001153797.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001153797.1 317 Q8NGX9 317 100% 0 0

Chromosomal Locations for CCDS 53391.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 158562651 158563604 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (954 nt):
ATGAGAAATTTGAGTGGAGGCCATGTCGAGGAGTTTGTCTTGGTGGGTTTCCCTACCACGCCTCCCCTCC
AGCTGCTCCTCTTTGTCCTTTTTTTTGCAATTTACCTTCTGACATTGTTGGAGAATGCACTTATTGTCTT
CACAATATGGCTTGCTCCAAGCCTTCATCGTCCCATGTACTTTTTCCTTGGCCATCTCTCTTTCCTGGAG
CTATGGTACATCAATGTCACCATTCCTCGGCTCTTGGCAGCCTTTCTTACCCAGGATGGTAGAGTCTCCT
ACGTAGGTTGCATGACCCAACTGTACTTCTTTATTGCCTTAGCCTGTACTGAATGTGTGCTGTTGGCAGT
TATGGCCTATGATCGCTACCTGGCCATCTGTGGACCCCTCCTTTACCCTAGTCTCATGCCTTCCAGTCTG
GCCACTCGCCTTGCTGCTGCCTCTTGGGGCAGTGGCTTCTTCAGCTCCATGATGAAGCTTCTTTTTATTT
CCCAATTGTCCTACTGTGGACCCAACATTATCAACCACTTTTTCTGTGATATTTCCCCACTACTCAACCT
CACCTGCTCTGACAAGGAGCAAGCAGAGCTAGTAGACTTCCTTCTGGCCCTGGTGATGATTCTACTCCCT
CTATTGGCTGTGGTTTCATCATACACTGCCATCATTGCAGCCATCCTGAGGATCCCTACGTCCAGGGGAC
GCCACAAAGCCTTTTCCACTTGTGCCGCTCATCTGGCAGTGGTTGTTATCTACTACTCCTCCACTCTCTT
CACCTATGCACGGCCCCGGGCCATGTACACCTTCAACCACAACAAGATTATCTCTGTGCTCTACACTATC
ATTGTACCATTCTTCAACCCAGCCATCTACTGCCTGAGGAACAAGGAGGTGAAGGAGGCCTTCAGGAAGA
CAGTGATGGGCAGATGTCACTATCCTAGGGATGTTCAGGACTGA

Translation (317 aa):
MRNLSGGHVEEFVLVGFPTTPPLQLLLFVLFFAIYLLTLLENALIVFTIWLAPSLHRPMYFFLGHLSFLE
LWYINVTIPRLLAAFLTQDGRVSYVGCMTQLYFFIALACTECVLLAVMAYDRYLAICGPLLYPSLMPSSL
ATRLAAASWGSGFFSSMMKLLFISQLSYCGPNIINHFFCDISPLLNLTCSDKEQAELVDFLLALVMILLP
LLAVVSSYTAIIAAILRIPTSRGRHKAFSTCAAHLAVVVIYYSSTLFTYARPRAMYTFNHNKIISVLYTI
IVPFFNPAIYCLRNKEVKEAFRKTVMGRCHYPRDVQD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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