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Report for CCDS5417.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5417.1 Public Homo sapiens 7 CREB5 24 110 108 CCDS HistoryNCBI Gene:9586Re-query CCDS DB by CCDS ID:5417.1Re-query CCDS DB by GeneID:9586See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5417.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000357727.7 ENSP00000350359.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000357727.7Link to Ensembl Protein Viewer:ENSP00000350359.2Re-query CCDS DB by Nucleotide ID:ENST00000357727Re-query CCDS DB by Protein ID:ENSP00000350359
Original member Current member NCBI NM_182898.4 NP_878901.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_182898.4Link to Protein Sequence:NP_878901.2Re-query CCDS DB by Nucleotide ID:NM_182898Re-query CCDS DB by Protein ID:NP_878901Link to BLAST:NP_878901.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_878901.2 508 Q02930-1 508 100% 0 0

Chromosomal Locations for CCDS 5417.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 28412915 28412917 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28488175 28488246 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28494906 28494999 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28507616 28507737 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28570365 28570537 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28718753 28718879 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28724222 28724332 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28804199 28804522 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28809187 28809414 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28818071 28818179 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28819116 28819279 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1527 nt):
ATGATTTATGAGGAATCCAAGATGAATTTGGAGCAGGAGAGGCCGTTTGTCTGCAGTGCCCCAGGCTGCT
CCCAGCGCTTCCCAACAGAGGACCATCTGATGATTCATAGGCACAAACATGAAATGACTTTGAAGTTTCC
TTCAATAAAAACAGACAATATGTTATCAGATCAAACTCCGACCCCAACGAGATTCCTGAAGAACTGCGAG
GAGGTGGGCCTCTTCAGCGAGCTGGACTGCTCCCTGGAGCACGAGTTCAGGAAGGCTCAGGAAGAGGAGA
GCAGCAAGCGGAATATCTCGATGCATAATGCAGTTGGTGGGGCCATGACGGGGCCCGGAACTCACCAGCT
TAGCAGCGCTCGGCTGCCCAACCATGACACCAACGTTGTGATTCAGCAAGCCATGCCGTCGCCTCAGTCC
AGCTCTGTCATCACTCAGGCACCTTCCACCAACCGCCAGATCGGGCCTGTCCCAGGCTCTCTATCTTCTC
TGCTACATCTCCACAACAGACAGAGACAGCCCATGCCAGCCTCCATGCCTGGGACCCTGCCCAACCCTAC
AATGCCAGGATCTTCCGCCGTCTTGATGCCAATGGAGCGACAAATGTCAGTGAACTCCAGCATCATGGGG
ATGCAAGGTCCAAATCTCAGCAACCCCTGTGCTTCTCCCCAGGTCCAGCCAATGCATTCAGAAGCCAAAA
TGAGGTTGAAGGCTGCATTGACTCACCACCCTGCTGCCATGTCAAATGGGAACATGAACACCATGGGACA
CATGATGGAGATGATGGGCTCCCGGCAGGACCAGACGCCACACCATCACATGCACTCGCACCCGCATCAG
CACCAGACACTGCCACCCCATCACCCTTACCCACACCAGCACCAGCACCCAGCACACCATCCTCACCCTC
AACCCCATCACCAGCAGAACCATCCACATCACCACTCCCATTCCCACCTTCATGCACACCCAGCACATCA
CCAGACCTCGCCACATCCGCCCCTGCACACCGGCAACCAAGCACAGGTTTCACCAGCAACACAACAGATG
CAGCCAACCCAGACAATACAGCCACCCCAGCCCACAGGGGGGCGCCGGCGAAGGGTGGTAGACGAGGATC
CGGACGAGAGGCGGCGGAAATTTCTGGAACGGAACCGGGCAGCTGCCACCCGCTGCAGACAGAAGAGGAA
GGTCTGGGTGATGTCATTGGAAAAGAAAGCAGAAGAACTCACCCAGACAAACATGCAGCTTCAGAATGAA
GTGTCTATGTTGAAAAATGAGGTGGCCCAGCTGAAACAGTTGTTGTTAACACATAAAGACTGCCCAATAA
CAGCCATGCAGAAAGAATCACAAGGATATCTAAGTCCAGAGAGTAGCCCTCCTGCTAGTCCTGTCCCAGC
TTGCTCCCAGCAACAAGTCATCCAGCATAATACCATCACTACTTCCTCATCGGTCAGCGAGGTGGTAGGA
AGCTCCACCCTCAGCCAGCTCACCACTCACAGAACAGACCTGAATCCGATTCTTTAA

Translation (508 aa):
MIYEESKMNLEQERPFVCSAPGCSQRFPTEDHLMIHRHKHEMTLKFPSIKTDNMLSDQTPTPTRFLKNCE
EVGLFSELDCSLEHEFRKAQEEESSKRNISMHNAVGGAMTGPGTHQLSSARLPNHDTNVVIQQAMPSPQS
SSVITQAPSTNRQIGPVPGSLSSLLHLHNRQRQPMPASMPGTLPNPTMPGSSAVLMPMERQMSVNSSIMG
MQGPNLSNPCASPQVQPMHSEAKMRLKAALTHHPAAMSNGNMNTMGHMMEMMGSRQDQTPHHHMHSHPHQ
HQTLPPHHPYPHQHQHPAHHPHPQPHHQQNHPHHHSHSHLHAHPAHHQTSPHPPLHTGNQAQVSPATQQM
QPTQTIQPPQPTGGRRRRVVDEDPDERRRKFLERNRAAATRCRQKRKVWVMSLEKKAEELTQTNMQLQNE
VSMLKNEVAQLKQLLLTHKDCPITAMQKESQGYLSPESSPPASPVPACSQQQVIQHNTITTSSSVSEVVG
SSTLSQLTTHRTDLNPIL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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