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Report for CCDS54704.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
54704.1 Public Homo sapiens 4 RNF212 24 110 108 CCDS HistoryNCBI Gene:285498Re-query CCDS DB by CCDS ID:54704.1Re-query CCDS DB by GeneID:285498See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 54704.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000333673.5 ENSP00000327481.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000333673.5Link to Ensembl Protein Viewer:ENSP00000327481.5Re-query CCDS DB by Nucleotide ID:ENST00000333673Re-query CCDS DB by Protein ID:ENSP00000327481
Original member Current member NCBI NM_001193318.3 NP_001180247.1 Accepted alive Link to Nucleotide Sequence:NM_001193318.3Link to Protein Sequence:NP_001180247.1Re-query CCDS DB by Nucleotide ID:NM_001193318Re-query CCDS DB by Protein ID:NP_001180247Link to BLAST:NP_001180247.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001180247.1 273 Q495C1-6 273 100% 0 0

Chromosomal Locations for CCDS 54704.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 1093439 1094014 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 1096765 1096839 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 1108343 1108404 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 1113356 1113464 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (822 nt):
ATGGCCAACTGGGTGTTCTGTAATCGCTGCTTCCAGCCGCCCCACAGGACGTCGTGCTTCAGCCTCACCA
ACTGCGGGCACGTGTACTGCGACGCCTGCCTCGGCAAAGGTAAAAAGAATGAATGCTTGATTTGTAAAGC
TCCTTGTCGTACAGTTTTGCTTTCAAAGCATACCGACGCAGATATCCAGGCATTCTTCATGAGCATAGAC
AGTCTGTGTAAGAAGTACTCCAGGGAAACCTCCCAGTATCTCAGGCTTTCCCGAGGCTGTTGCCGTCTCA
AGTTATGCCCAGCCACATCCTCCAAGGAGGTGCCCAGAGGCTCGACCCATGGAAGCCAAGCAGCAGCCAG
AGATCCCCAAGAACACTGGGTCAGCACAACACGGGCACCCAGACCAGGATGCCGGCGGTCCCAGAGCCAG
CCAGAGGCCCAGGGAAACACCATCCAGGACGCACCTCACCCCCTCACCCTGCTCCATCCCAGCAGGACCC
TCATTCACACCAAGTCCCCTTGGGGCCAGAAGTTGCTTGAGTTCATAAAACATGTCTGTTATCACAGACA
TCAGAGCCACAGGCCGTGCGCTCCAGGGTGGTTTTGCCAAGTGCTGCAGAGGCCAGGTGCTGTCTCAGGA
GAGAAGACCCAGCAGACCCGGCCAGCCCCTCCAGCCACCTGTCTGCTCTGCCTCTCGTGCCTCTCAGGCT
TCCGGCATGGGCCGTGGAGGTCACAGGCTCTGCCCAGTGACCTCGTGGCCCCACTGTTTGTCAGTTACAC
TGTGGAGGTGAGCATCACAAACGCAGGGTGGAGTTTTCCCGCAGCTGTGTGA

Translation (273 aa):
MANWVFCNRCFQPPHRTSCFSLTNCGHVYCDACLGKGKKNECLICKAPCRTVLLSKHTDADIQAFFMSID
SLCKKYSRETSQYLRLSRGCCRLKLCPATSSKEVPRGSTHGSQAAARDPQEHWVSTTRAPRPGCRRSQSQ
PEAQGNTIQDAPHPLTLLHPSRTLIHTKSPWGQKLLEFIKHVCYHRHQSHRPCAPGWFCQVLQRPGAVSG
EKTQQTRPAPPATCLLCLSCLSGFRHGPWRSQALPSDLVAPLFVSYTVEVSITNAGWSFPAAV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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