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Report for CCDS55138.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
55138.1 Public Homo sapiens 7 FBXO24 24 110 108 CCDS HistoryNCBI Gene:26261Re-query CCDS DB by CCDS ID:55138.1Re-query CCDS DB by GeneID:26261See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 55138.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000468962.5 ENSP00000420239.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000468962.5Link to Ensembl Protein Viewer:ENSP00000420239.1Re-query CCDS DB by Nucleotide ID:ENST00000468962Re-query CCDS DB by Protein ID:ENSP00000420239
Original member Current member NCBI NM_001163499.2 NP_001156971.1 Accepted alive Link to Nucleotide Sequence:NM_001163499.2Link to Protein Sequence:NP_001156971.1Re-query CCDS DB by Nucleotide ID:NM_001163499Re-query CCDS DB by Protein ID:NP_001156971Link to BLAST:NP_001156971.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001156971.1 568 O75426-4 568 100% 0 0

Chromosomal Locations for CCDS 55138.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 100589641 100589643 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100589977 100590075 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100590174 100590357 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100591667 100591902 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100592783 100593017 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100594383 100594541 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100595102 100595223 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100595575 100595706 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100600031 100600201 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100600534 100600899 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1707 nt):
ATGGTGAAGAGAAGCTGCCCTTCTTGTGGCTCGGAGCTTGGGGTTGAAGAGAAGAGGGGGAAAGGAAATC
CGATTTCCATCCAGTTGTTCCCCCCAGAGCTGGTGGAGCATATCATCTCATTCCTCCCAGTCAGAGACCT
TGTTGCCCTCGGCCAGACCTGCCGCTACTTCCACGAAGTGTGCGATGGGGAAGGCGTGTGGAGACGCATC
TGTCGCAGACTCAGTCCGCGCCTCCAAGATCAGGGTTCTGGAGTCCGGCCCTGGAAGAGAGCTGCCATTC
TGAACTACACGAAGGGCCTGTATTTCCAGGCATTTGGAGGCCGCCGCCGATGTCTCAGCAAGAGCGTGGC
CCCCTTGCTAGCCCACGGCTACCGCCGCTTCTTGCCCACCAAGGATCACGTCTTCATTCTTGACTACGTG
GGGACCCTCTTCTTCCTCAAAAATGCCCTGGTCTCCACCCTCGGCCAGATGCAGTGGAAGCGGGCCTGTC
GCTATGTTGTGTTGTGTCGTGGAGCCAAGGATTTTGCCTCGGACCCAAGGTGTGACACAGTTTACCGTAA
ATACCTCTACGTCTTGGCCACTCGGGAGCCGCAGGAAGTGGTGGGTACCACCAGCAGCCGGGCCTGTGAC
TGTGTTGAGGTCTATCTGCAGTCTAGTGGGCAGCGGGTCTTCAAGATGACATTCCACCACTCAATGACCT
TCAAGCAGATCGTGCTGGTTGGTCAGGAGACCCAGCGGGCTCTACTGCTCCTCACAGAGGAAGGAAAGAT
CTACTCTTTGGTAGTGAATGAGACCCAGCTTGACCAGCCACGCTCCTACACGGTTCAGCTGGCCCTGAGG
AAGGTGTCCCACTACCTGCCTCACCTGCGCGTGGCCTGCATGACTTCCAACCAGAGCAGCACCCTCTACG
TCACAGACCAGGGGGGAGTGTATTTTGAGGTGCATACCCCAGGGGTGTATCGCGATCTCTTTGGGACCCT
TCAAGCCTTTGACCCCCTGGACCAGCAGATGCCGCTTGCTCTCTCACTGCCTGCCAAGATCCTATTCTGT
GCTCTTGGCTACAACCACCTTGGCCTGGTGGATGAATTTGGCCGAATCTTCATGCAAGGAAATAACAGAT
ACGGGCAGCTAGGAACAGGGGACAAAATGGACCGAGGGGAACCCACACAGGTTTGTTACCTGCAGCGGCC
CATCACCCTGTGGTGCGGCCTCAACCACTCCCTGGTGCTGAGCCAGAGCTCAGAGTTCAGCAAGGAGCTG
CTGGGCTGCGGCTGTGGGGCTGGGGGCCGCCTCCCAGGCTGGCCCAAGGGGAGTGCCTCCTTCGTCAAGC
TCCAAGTCAAGGTCCCTCTGTGTGCCTGTGCCCTCTGTGCCACCAGGGAGTGCCTATACATCCTGTCCAG
CCACGACATTGAGCAGCACGCCCCCTATCGCCACCTGCCAGCCAGCAGGGTGGTGGGGACTCCTGAGCCC
AGCCTGGGGGCCAGAGCACCCCAGGACCCCGGGGGGATGGCCCAGGCCTGCGAGGAGTACCTCAGCCAGA
TCCACAGTTGCCAAACGTTGCAGGACCGCACGGAGAAGATGAAGGAGATCGTAGGGTGGATGCCCCTGAT
GGCCGCACAGAAGGACTTCTTCTGGGAGGCCCTGGACATGCTGCAGAGGGCTGAAGGAGGCGGGGGTGGT
GTAGGGCCCCCAGCCCCTGAGACCTAA

Translation (568 aa):
MVKRSCPSCGSELGVEEKRGKGNPISIQLFPPELVEHIISFLPVRDLVALGQTCRYFHEVCDGEGVWRRI
CRRLSPRLQDQGSGVRPWKRAAILNYTKGLYFQAFGGRRRCLSKSVAPLLAHGYRRFLPTKDHVFILDYV
GTLFFLKNALVSTLGQMQWKRACRYVVLCRGAKDFASDPRCDTVYRKYLYVLATREPQEVVGTTSSRACD
CVEVYLQSSGQRVFKMTFHHSMTFKQIVLVGQETQRALLLLTEEGKIYSLVVNETQLDQPRSYTVQLALR
KVSHYLPHLRVACMTSNQSSTLYVTDQGGVYFEVHTPGVYRDLFGTLQAFDPLDQQMPLALSLPAKILFC
ALGYNHLGLVDEFGRIFMQGNNRYGQLGTGDKMDRGEPTQVCYLQRPITLWCGLNHSLVLSQSSEFSKEL
LGCGCGAGGRLPGWPKGSASFVKLQVKVPLCACALCATRECLYILSSHDIEQHAPYRHLPASRVVGTPEP
SLGARAPQDPGGMAQACEEYLSQIHSCQTLQDRTEKMKEIVGWMPLMAAQKDFFWEALDMLQRAEGGGGG
VGPPAPET


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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