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Report for CCDS55410.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
55410.1 Public Homo sapiens X GLOD5 24 110 108 CCDS HistoryNCBI Gene:392465Re-query CCDS DB by CCDS ID:55410.1Re-query CCDS DB by GeneID:392465See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 55410.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000303227.11 ENSP00000302552.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000303227.11Link to Ensembl Protein Viewer:ENSP00000302552.6Re-query CCDS DB by Nucleotide ID:ENST00000303227Re-query CCDS DB by Protein ID:ENSP00000302552
Original member Current member NCBI NM_001080489.3 NP_001073958.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001080489.3Link to Protein Sequence:NP_001073958.2Re-query CCDS DB by Nucleotide ID:NM_001080489Re-query CCDS DB by Protein ID:NP_001073958Link to BLAST:NP_001073958.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001073958.2 160 A6NK44 160 100% 0 0

Chromosomal Locations for CCDS 55410.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 48761791 48761853 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 48765835 48765972 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 48770927 48771082 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 48773310 48773435 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (483 nt):
ATGCTGCGCCATCTGCCCTCCAGGCTGCCAGTCAAGATGTGGGGCAGGACTTTGGAGAAACAGTCATGGA
GGGACAGCAGTCAGACCCCTCCCCCATGTCTTATCCGTAGACTTGACCACATCGTGATGACGGTGAAGAG
CATCAAAGACACCACCATGTTTTATTCCAAGATCCTGGGCATGGAGGTCATGACTTTTAAGGAAGACCGG
AAAGCACTGTGTTTTGGAGACCAGAAATTTAACCTCCACGAGGTGGGAAAGGAATTTGAACCCAAAGCCG
CTCACCCAGTTCCTGGCTCCCTGGACATATGTCTGATCACAGAGGTGCCTTTGGAGGAAATGATCCAGCA
CCTCAAGGCTTGTGATGTCCCTATTGAGGAGGGGCCAGTCCCCAGAACAGGGGCAAAAGGGCCTATCATG
TCCATCTACTTCCGAGACCCCGACAGAAATCTGATTGAGGTGTCCAACTACATCTCCTCGTGA

Translation (160 aa):
MLRHLPSRLPVKMWGRTLEKQSWRDSSQTPPPCLIRRLDHIVMTVKSIKDTTMFYSKILGMEVMTFKEDR
KALCFGDQKFNLHEVGKEFEPKAAHPVPGSLDICLITEVPLEEMIQHLKACDVPIEEGPVPRTGAKGPIM
SIYFRDPDRNLIEVSNYISS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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