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Report for CCDS55908.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
55908.1 Public Homo sapiens 14 MDP1 24 110 108 CCDS HistoryNCBI Gene:145553Re-query CCDS DB by CCDS ID:55908.1Re-query CCDS DB by GeneID:145553See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 9, NCBI annotation release 37.3, Ensembl annotation release 64

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 55908.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000396833.2 ENSP00000380045.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000396833.2Link to Ensembl Protein Viewer:ENSP00000380045.2Re-query CCDS DB by Nucleotide ID:ENST00000396833Re-query CCDS DB by Protein ID:ENSP00000380045
Original member Current member NCBI NM_001199821.2 NP_001186750.1 Accepted alive Link to Nucleotide Sequence:NM_001199821.2Link to Protein Sequence:NP_001186750.1Re-query CCDS DB by Nucleotide ID:NM_001199821Re-query CCDS DB by Protein ID:NP_001186750Link to BLAST:NP_001186750.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001186750.1 122 Q86V88-3 122 100% 0 0

Chromosomal Locations for CCDS 55908.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 24214046 24214151 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24214546 24214599 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24215552 24215662 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24215737 24215797 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24215919 24215955 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (369 nt):
ATGGCGCGGCTACCGAAGCTGGCAGTCTTTGATTTGGATTACACTCTCTGGCCTTTCTGGGTCGACACGC
ACGTAGACCCTCCGTTCCATAAGAGCAGTGATGGAACTGTACGAGATAGGCGGGGCCAAGACGTCCGACT
GTACCCAGAGGTGCCTGAGGTCCTAAAACGATTGCAGAGCCTTGGGGTGCCCGGTGCGGCTGCTTCAAGG
ACAAGTGAGATAGAAGGGGCCAACCAGCTACTGGAGCTCTTTGACCTCTTCAGGTGTTACCTGCATTCAC
ATCCAGAATGGAATGAATCTTCAAACTCTAAGTCAAGGGTTAGAGACATTTGCGAAGGCCCAAACTGGGC
CTTTGAGGTCCAGCCTTGA

Translation (122 aa):
MARLPKLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQDVRLYPEVPEVLKRLQSLGVPGAAASR
TSEIEGANQLLELFDLFRCYLHSHPEWNESSNSKSRVRDICEGPNWAFEVQP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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