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Report for CCDS56295.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
56295.1 Public Homo sapiens 3 ZBBX 24 110 108 CCDS HistoryNCBI Gene:79740Re-query CCDS DB by CCDS ID:56295.1Re-query CCDS DB by GeneID:79740See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 9, NCBI annotation release 37.3, Ensembl annotation release 64

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 56295.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000392764.5 ENSP00000376517.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000392764.5Link to Ensembl Protein Viewer:ENSP00000376517.1Re-query CCDS DB by Nucleotide ID:ENST00000392764Re-query CCDS DB by Protein ID:ENSP00000376517
Original member Current member EBI ENST00000392767.6 ENSP00000376520.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000392767.6Link to Ensembl Protein Viewer:ENSP00000376520.3Re-query CCDS DB by Nucleotide ID:ENST00000392767Re-query CCDS DB by Protein ID:ENSP00000376520
Original member Current member NCBI NM_001199202.2 NP_001186131.1 Accepted alive Link to Nucleotide Sequence:NM_001199202.2Link to Protein Sequence:NP_001186131.1Re-query CCDS DB by Nucleotide ID:NM_001199202Re-query CCDS DB by Protein ID:NP_001186131Link to BLAST:NP_001186131.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001186131.1 771 A8MT70-3 771 100% 0 0

Chromosomal Locations for CCDS 56295.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 167240793 167240919 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 167242505 167242643 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 167282238 167282495 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 167298305 167298458 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 167305643 167305950 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 167313974 167314116 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 167315750 167315829 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 167317005 167317105 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 167317488 167317597 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 167322117 167322237 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 167327942 167328116 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 167333827 167333985 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 167350420 167350515 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 167359870 167359979 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 167360675 167360723 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 167365886 167365976 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 167368461 167368555 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2316 nt):
ATGGAGAAAGTACAGTTAGAGTTTGAGAACCAAGAGATGGAGAAGAAACTGCAAGAATTCCGATCCACAA
GAAACAAAGAAAAGGAAGATAGAGAGTCAAGCGAGTATTACTGGAAATCTGGAAAAGTGGGCAAATTGGT
CAATCAATCATATATGATGTCACAAAATAAAGGAAATGTTGTTAAGTTTTCTGCTGGAAAAGTGAAATTA
AAATTGCTGAAGGAACAGATTCAAGAGCCAGTGAAACCAACAGTTAATTATAAAATGGCAAATTCTTCAG
AATGTGAAAAACCCAAGATAAATGGGAAAGTATGTGGACAGTGTGAGAACAAAGCTGCTCTACTGGTATG
CCTTGAATGTGGAGAAGATTATTGTTCAGGATGCTTTGCTAAAGTTCACCAGAAAGGGGCACTAAAGCTC
CACAGAACAACTCTTTTGCAGGCAAAATCTCAAATATTATTCAATGTATTGGATGTTGCCCATCAGTTTA
TAAAGGATGTTAATCCAGATGAACCCAAAGAGGAGAATAATTCTACAAAGGAAACCAGTAAAATTCAACA
TAAACCCAAATCTGTACTTCTCCAGAGGAGCAGCTCTGAGGTAGAAATTACAACGATGAAAAGAGCACAA
CGTACAAAACCAAGAAAGAGTCTGTTGTGTGAAGGGTCATTCGATGAAGAAGCTTCTGCACAGTCCTTTC
AGGAAGTGTTAAGTCAATGGAGAACCGGAAATCATGATGACAACAAGAAACAGAATTTACATGCAGCAGT
AAAAGACTCATTGGAAGAATGCGAAGTACAGACTAATCTGAAAATTTGGAGAGAACCACTTAATATTGAA
CTTAAAGAAGACATTCTATCCTATATGGAAAAATTATGGCTTAAAAAACACAGGAGAACTCCACAAGAGC
AACTTTTTAAAATGCTACCAGATACGTTCCCACATCCACATGAAACCACTGGTGATGCACAGTGTTCTCA
AAATGAAAACGATGAAGATAGTGATGGTGAGGAGACCAAAGTACAACACACAGCTCTTTTATTGCCAGTA
GAAACATTAAACATAGAGAGACCTGAACCATCTCTAAAGATAGTCGAACTGGATGATACTTATGAAGAGG
AATTTGAAGAAGCAGAAAATATTGTGCCTTACAAAGTTAAATTAGCTGATGCAGACAGTCAACGAAGTTG
TGCTTTTCATGATTGTCAGAAGAATAGCTTTCCATATGAAAATGGCATCCATCAACATCATGTTTTCGAT
AAGGGAAAGAGAGACTTCTTAAATCTTTGTCTGAGAAACAGCTCTACTTATTATAAAGATAATTCAAAAG
CAGAAACTTCAAACACAGATTTTGACAACATCGTGGATCCTGATGTGTATTCTTCTGACATTGAAAAAAT
TGAGGAAAGCACCTCCTTTGAAAGAAATTTAAAGGAGAAAAATATAGGTTTAGAAAGTAATCAAAAGTCT
GATGATTCCTGTGTATCACTTGAAAGCAAGGACACTTTGCTAGGTAGAGATTTAGAAAAAGCTCCCATTG
AGGAGAAATTATCTCAAGACATCAAAGAATCCTTGGAATTGAGCAATCTGTATAAGAGGCCAAGCTTTGA
AGAATCAAAAACTACAAAGTCATCACTGTTGTTACAAGAAATAGCCTGCAGAAGTAAGCCTATAACAAAA
CAATATCAAGGACTTGAGAGATTCTTTATTTTTGATACAAATGAAAGACTCAACTTACTTCCTTCTCATC
GTTTAGAATGCAACAATTCCAGTACTAGGATTACACTTGCAGGTCAGAAATCACAGAGACCTTCAACAGC
AAATTTTCCACTTTCCAACTCTGTTAAAGAAAGCTCCAGTTGCCTTTCATCCTCTCATCCTCGATCAAGA
AGTGCAGCTGCTCAATCATCATCTAGAGCTGCTTCTGAAATTTCAGAAATTGAATATATTGATATTACTG
ACCAGAATGAGCTTTCCTTAGATGACACTACTGATCAACATACTTTAGACAATTTGGAAAAAGAATTACA
AGTGCTGAGATCTCTTGCAGATACTTCAGAAAAGCTTTACAGCTTAACCTCAGAAGAGTTCCCAGATTTC
AGCAGCCAATCACTGAATATAAGTCAGATTTCCACAGATTTCCTTAAGACCTCACATGTGAGGGGTCCCT
GTGGAGTTGAGGAATTGAGCTGTTCTGGAAGAGATACCAAAATTCAGTCTTTGCTGTCACTTTCTGAGAG
CAGTACAGATGAGGAGGAGGAAGATTTTCTCAACAAGCAACATGTCATCACACTACCGTGGTCAAAGAGT
ACTTAA

Translation (771 aa):
MEKVQLEFENQEMEKKLQEFRSTRNKEKEDRESSEYYWKSGKVGKLVNQSYMMSQNKGNVVKFSAGKVKL
KLLKEQIQEPVKPTVNYKMANSSECEKPKINGKVCGQCENKAALLVCLECGEDYCSGCFAKVHQKGALKL
HRTTLLQAKSQILFNVLDVAHQFIKDVNPDEPKEENNSTKETSKIQHKPKSVLLQRSSSEVEITTMKRAQ
RTKPRKSLLCEGSFDEEASAQSFQEVLSQWRTGNHDDNKKQNLHAAVKDSLEECEVQTNLKIWREPLNIE
LKEDILSYMEKLWLKKHRRTPQEQLFKMLPDTFPHPHETTGDAQCSQNENDEDSDGEETKVQHTALLLPV
ETLNIERPEPSLKIVELDDTYEEEFEEAENIVPYKVKLADADSQRSCAFHDCQKNSFPYENGIHQHHVFD
KGKRDFLNLCLRNSSTYYKDNSKAETSNTDFDNIVDPDVYSSDIEKIEESTSFERNLKEKNIGLESNQKS
DDSCVSLESKDTLLGRDLEKAPIEEKLSQDIKESLELSNLYKRPSFEESKTTKSSLLLQEIACRSKPITK
QYQGLERFFIFDTNERLNLLPSHRLECNNSSTRITLAGQKSQRPSTANFPLSNSVKESSSCLSSSHPRSR
SAAAQSSSRAASEISEIEYIDITDQNELSLDDTTDQHTLDNLEKELQVLRSLADTSEKLYSLTSEEFPDF
SSQSLNISQISTDFLKTSHVRGPCGVEELSCSGRDTKIQSLLSLSESSTDEEEEDFLNKQHVITLPWSKS
T


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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