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Report for CCDS56828.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
56828.1 Public Mus musculus 11 Myadml2 23 108 98 CCDS HistoryNCBI Gene:68515Re-query CCDS DB by CCDS ID:56828.1Re-query CCDS DB by GeneID:68515See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 10, NCBI annotation release 38.1, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 56828.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000026134.2 ENSMUSP00000026134.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000026134.2Link to Ensembl Protein Viewer:ENSMUSP00000026134.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000026134Re-query CCDS DB by Protein ID:ENSMUSP00000026134
Original member Current member NCBI NM_001204820.1 NP_001191749.1 Accepted alive Link to Nucleotide Sequence:NM_001204820.1Link to Protein Sequence:NP_001191749.1Re-query CCDS DB by Nucleotide ID:NM_001204820Re-query CCDS DB by Protein ID:NP_001191749Link to BLAST:NP_001191749.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001191749.1 153 Q08AU7-2 153 100% 0 0

Chromosomal Locations for CCDS 56828.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 120646349 120646441 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 120647639 120648007 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (462 nt):
ATGGGCAGCACCATGGAGCCCCCAGGGGGTGCATACCTGCACTTAGGCGCTGTGACCTCGCCGGTGGGTA
CAGCCCGAATGCTGCAGCTGGCCTTTGGCTGTACCACTTTCAGTTTGGTTGCTCACCGAGGTGGTTTTGG
GGGTGTCCAGGGCACTTTCTGCATGGCTGCTTGGGGCTTCTGTTTTGCCTTCTCAGTCTTGGTGGTAGCC
TGTGAGTTCACAAAGCTTCACAGCTGCCTGCGCCTTTCCTGGGGCAACTTCACAGCAGCCTTCGCCATGT
TGGCGACCCTGCTGTGTGCCACGGCCGCTGTCATCTACCCTCTGTACTTCACCCGACTGGAGTGCCCACC
TGAGCCTGCCGGATGCATGGTAGCCCCATGTCAAAGGCCAGCACCAGAATCTCCGTGGAAAGATGATGAT
GTCATGACAGCGATGGAATATCTGTCCAGACACCCAACATAG

Translation (153 aa):
MGSTMEPPGGAYLHLGAVTSPVGTARMLQLAFGCTTFSLVAHRGGFGGVQGTFCMAAWGFCFAFSVLVVA
CEFTKLHSCLRLSWGNFTAAFAMLATLLCATAAVIYPLYFTRLECPPEPAGCMVAPCQRPAPESPWKDDD
VMTAMEYLSRHPT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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