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Report for CCDS56962.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
56962.1 Public Mus musculus 14 Gucy1b2 23 108 98 CCDS HistoryNCBI Gene:239134Re-query CCDS DB by CCDS ID:56962.1Re-query CCDS DB by GeneID:239134See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 10, NCBI annotation release 38.1, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 56962.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000165651.7 ENSMUSP00000128114.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000165651.7Link to Ensembl Protein Viewer:ENSMUSP00000128114.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000165651Re-query CCDS DB by Protein ID:ENSMUSP00000128114
Original member Current member NCBI NM_001204340.1 NP_001191269.1 Accepted alive Link to Nucleotide Sequence:NM_001204340.1Link to Protein Sequence:NP_001191269.1Re-query CCDS DB by Nucleotide ID:NM_001204340Re-query CCDS DB by Protein ID:NP_001191269Link to BLAST:NP_001191269.1

Chromosomal Locations for CCDS 56962.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 62392821 62392966 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 62403171 62403269 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 62404487 62404638 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 62406118 62406272 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 62407686 62407832 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 62408662 62408810 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 62411499 62411819 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 62414240 62414456 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 62415901 62416004 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 62417200 62417311 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 62419079 62419230 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 62420102 62420201 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 62422860 62423020 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 62433837 62433931 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 62448195 62448268 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 62453331 62453453 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 62456076 62456198 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2430 nt):
ATGGTGATGTCTGAAGTGTTGTGTGCTGAGTATACGCTAAAAGTTAAAATGTCAGACACAGCAGACGGTG
TGCTGTATGAGCCTCTGCGAGCGGAGTTTAGGAGCAAGCGAACCCATCTACAGGGCTCAGCAGAAGGCCG
AGGTCAGTTCCTAGCTTCACTGCAGAGCACCTCAACTGCCTTCCAGAGATTCGGTAAGACGCCGGGTGTG
CAGCTCCGGCCTGGAGACACGACGCTGGACACCATGTACGGATTTATCAACACCTGTCTGCAGTCTCTTG
TGACAGAGAAATTTGGAGAGGAGACGTGGGAAAAGCTAAAGGCTTCTGCAGAAGTGCAAGATGTCTTCAT
GACCTACACCGTGTATGATGATACCATCACCGTTAAGCTCATCCAAGAAGCCTGCAAGGCTCTGGATGTT
TCCATGGAAGCCATTCTGAAGCTCTTTGGCGAATACTTCTTTAAGTTCTGTAAGATGTCCGGCTATGACA
GGATGCTACGGACACTTGGAGGAAATCTCACAGAGTTTATTGAAAATCTAGATGCCCTCCACAGTTACCT
GGCACTGTCCTATCAGGAAATGAACGCACCGTCCTTTCGAGTGGAGGGAGGAGCAGACGGGGCAATGCGT
CTCCATTACTACTCAGACAGACGTGGTCTGTGTCACATCGTACCAGGCATCATTGAAGCTGTGGCCAAGG
ACTTCTTTGACACTGATGTGGCCATGAGTATCCTTGATATGAATGAAGAGGTGGAAAGGACAGGGAAGAA
AGAACATGTCGTGTTCCTTGTTGTGCAGAAGGCTCGAAGACAGATAAGAGGGGCAAAGTCTCTTCAGGGA
ACACTCCTTAGGAAGAAGGAGAGGTATTTAAGCATCCCTGTTTGCCCTGGGGAGAAATCTCACTCAGCTG
TTGTGAGGGCATCAGTCCTGCTTGGAAAAGGGCCCCTTGGGGACACCTTCCAGCCTGTCTTTCCTGAGAG
ACTGTGGATTGAAGAGGAGGTGTTCTGCAATGCTTTTCCTTTCCACGTTGTCTTTGACGAAGCACTAAGG
GTCAAGCAAGCTGGAGTGAATATTCAGAAGTATGTCCCTGGAATCTTGACCCAGAAGTTTGGTCTAGATG
AGTATTTCTCCATCGTCCACCCTCAAGTTACTTTCAACATCTCCAGCATCTGCAAGTTCATTAACAGTCA
GTTTATCTTGAAGACACGAAGAGAGATGATGCCCGAAGCATGGAAGAGCCAGCCGACACTCAAACTCCGG
GGTCAGATGATCTGGATGGAGTCTCTGAAGTGCATGGTCTTCATGTGTTCTCCAAAGCTCCGCAGCCTGC
AAGAGCTGGAGGAGAGCAAGATGCATCTTTCCGACATCGCTCCCCACGACACGACCAGGGATCTCATCCT
CCTCAACCAGCAGAGGCTGGCAGAGATGGAACTGTCCTGCCAACTGGAGAAGAAGAAGGAGGAGTTGCGT
GTCCTTTCCAATCACCTGGCCATTGAAAAGAAGAAGACAGAGACCTTGCTGTATGCCATGCTGCCTGAAC
ATGTGGCCAACCAGCTCAAGGAGGGCAAAAAGGTGGCGGCAGGAGAATTCGAGACGTGTACCATCCTTTT
CAGCGATGTTGTGACATTCACCAACATCTGTGCGGCCTGTGAACCTATCCAAATAGTGAACATGCTCAAC
TCAATGTACTCCAAGTTTGACAGGTTAACCAACATCCATGATGTCTATAAAGTAGAAACAATAGGTGATG
CTTACATGGTGGTAGGTGGAGTACCAGTACCCGTTGAAAGCCATGCTCAAAGAGTTGCTAATTTTGCTCT
GGGGATGAGAATTTCTGCAAAAGAAGTGATGAATCCTGTCACTGGGGAACCCATACAGATCAGAGTGGGA
ATCCATACTGGACCAGTCTTAGCAGGTGTTGTGGGAGACAAGATGCCCCGGTACTGCCTGTTTGGTGACA
CCGTAAACACGGCCTCTAGGATGGAAAGTCACGGGCTTCCCAACAAAGTGCATCTGAGCCCCACAGCCCA
CAGGGCTCTGGAAAACAAAGGGTTTGAAATTGTCACGAGAGGGGAGATAGAGGTGAAGGGGAAAGGAAAA
ATGACCACATACTTCCTGATCCGGAACCTGAATGCCACCGAGGTTGAGATCATGGGGCGACCTTCAGCTC
TCGCTGATGGGAAGGAAGCAAGTACTCCTAGAAACCAAGTCAAGAAGCCCCGTGCTGTCCTGAGCAACAT
GGACCACCACCAGCAGCAAGTCTACAACAGTGATCCAGCAGACGCTTCTGATGAAGTCACACTTGCTGGG
AGTCCAGTGGCAGGGCGAGACGACACAGATGCAGTCAATAGCCAGTCATCACCAGATGAGACCAAGACAA
GTGCCTTTGCCAGTGACCCTGTGTTGTCTGCCTTCTGTGCTGTGTTGTGA

Translation (809 aa):
MVMSEVLCAEYTLKVKMSDTADGVLYEPLRAEFRSKRTHLQGSAEGRGQFLASLQSTSTAFQRFGKTPGV
QLRPGDTTLDTMYGFINTCLQSLVTEKFGEETWEKLKASAEVQDVFMTYTVYDDTITVKLIQEACKALDV
SMEAILKLFGEYFFKFCKMSGYDRMLRTLGGNLTEFIENLDALHSYLALSYQEMNAPSFRVEGGADGAMR
LHYYSDRRGLCHIVPGIIEAVAKDFFDTDVAMSILDMNEEVERTGKKEHVVFLVVQKARRQIRGAKSLQG
TLLRKKERYLSIPVCPGEKSHSAVVRASVLLGKGPLGDTFQPVFPERLWIEEEVFCNAFPFHVVFDEALR
VKQAGVNIQKYVPGILTQKFGLDEYFSIVHPQVTFNISSICKFINSQFILKTRREMMPEAWKSQPTLKLR
GQMIWMESLKCMVFMCSPKLRSLQELEESKMHLSDIAPHDTTRDLILLNQQRLAEMELSCQLEKKKEELR
VLSNHLAIEKKKTETLLYAMLPEHVANQLKEGKKVAAGEFETCTILFSDVVTFTNICAACEPIQIVNMLN
SMYSKFDRLTNIHDVYKVETIGDAYMVVGGVPVPVESHAQRVANFALGMRISAKEVMNPVTGEPIQIRVG
IHTGPVLAGVVGDKMPRYCLFGDTVNTASRMESHGLPNKVHLSPTAHRALENKGFEIVTRGEIEVKGKGK
MTTYFLIRNLNATEVEIMGRPSALADGKEASTPRNQVKKPRAVLSNMDHHQQQVYNSDPADASDEVTLAG
SPVAGRDDTDAVNSQSSPDETKTSAFASDPVLSAFCAVL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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