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Report for CCDS57139.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
57139.1 Public Mus musculus 19 Psat1 23 108 98 CCDS HistoryNCBI Gene:107272Re-query CCDS DB by CCDS ID:57139.1Re-query CCDS DB by GeneID:107272See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 10, NCBI annotation release 38.1, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 57139.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000162053.7 ENSMUSP00000125340.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000162053.7Link to Ensembl Protein Viewer:ENSMUSP00000125340.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000162053Re-query CCDS DB by Protein ID:ENSMUSP00000125340
Original member Current member NCBI NM_001205339.1 NP_001192268.1 Accepted alive Link to Nucleotide Sequence:NM_001205339.1Link to Protein Sequence:NP_001192268.1Re-query CCDS DB by Nucleotide ID:NM_001205339Re-query CCDS DB by Protein ID:NP_001192268Link to BLAST:NP_001192268.1

Chromosomal Locations for CCDS 57139.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 19 (NC_000085.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 15906046 15906151 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15906930 15907067 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15909301 15909429 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15914864 15915033 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15917077 15917249 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15918206 15918411 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15919455 15919524 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15920936 15920996 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15924304 15924354 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1104 nt):
ATGCCTCTCGTGGCCGGGAGCCCATGGACCAGCTGTCCAAGCTGCTATCTGGTATTGTTGGAGATCCAGA
AGCAGCTACTAGACTACAGAGGACTCGGCATCAGTGTGCTCGAAATGAGTCACAGGTCATCAGATTTTGC
CAAGATTATTGGCAATACAGAGAATCTTGTGAGGGAATTGCTAGCTGTTCCCAACAACTACAAGGTGATC
TTTGTACAAGGAGGTGGGTCTGGCCAGTTCAGTGCTGTCCCCTTAAATCTGATTGGCCTGAAAGCTGGAA
GGAGTGCTGACTACGTGGTGACCGGAGCTTGGTCAGCTAAGGCTGCGGAAGAAGCCAAGAAGTTTGGAAC
GGTGAACATTGTCCACCCTAAACTTGGAAGTTACACAAAAATTCCAGACCCAAGCACCTGGAACCTCAAC
CCGGACGCCTCCTATGTATACTTCTGTGCAAACGAGACTGTGCACGGGGTGGAGTTTGACTTCGTACCTG
ACGTCAAGGGAGCGGTGCTGGTCTGTGACATGTCCTCAAACTTCTTATCCAGGCCGGTGGATGTTTCCAA
GTTTGGTGTGATTTTCGCTGGTGCTCAGAAGAATGTTGGCTCTGCCGGGGTGACGGTGGTGATTGTCCGG
GATGACCTGCTGGGGTTCTCGCTCAGAGAGTGCCCATCAGTCCTTGACTACAAAGTGCAGGCTGGGAACA
ACTCTTTGTATAACACACCTCCGTGCTTCAGCATCTACGTCATGGGCATGGTCCTGGAATGGATCAAGAA
CAACGGCGGGGCCGCAGCCATGGAGAAGCTCAGCTCCATCAAATCCCAAATGATTTATGAGATCATTGAT
AATTCTCAAGGATTTTATGTATGCCCAGTGGAGCGCCAGAATAGAAGCAGGATGAACATCCCATTTCGCA
TTGGCAACGCCAAAGGAGACGAAGCTTTGGAAAAGCGGTTTCTTGACAAGGCGGTAGAACTCAACATGAT
CTCCTTGAAGGGGCACAGGTCAGTGGGAGGCATTCGTGCCTCTCTGTATAACGCTGTCACAACCGAAGAC
GTTGAGAAGCTGGCGGCCTTCATGAAGAATTTCTTGGAGATGCATCAGCTGTGA

Translation (367 aa):
MPLVAGSPWTSCPSCYLVLLEIQKQLLDYRGLGISVLEMSHRSSDFAKIIGNTENLVRELLAVPNNYKVI
FVQGGGSGQFSAVPLNLIGLKAGRSADYVVTGAWSAKAAEEAKKFGTVNIVHPKLGSYTKIPDPSTWNLN
PDASYVYFCANETVHGVEFDFVPDVKGAVLVCDMSSNFLSRPVDVSKFGVIFAGAQKNVGSAGVTVVIVR
DDLLGFSLRECPSVLDYKVQAGNNSLYNTPPCFSIYVMGMVLEWIKNNGGAAAMEKLSSIKSQMIYEIID
NSQGFYVCPVERQNRSRMNIPFRIGNAKGDEALEKRFLDKAVELNMISLKGHRSVGGIRASLYNAVTTED
VEKLAAFMKNFLEMHQL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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