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Report for CCDS57407.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
57407.1 Public Mus musculus 6 Peg10 23 108 98 CCDS HistoryNCBI Gene:170676Re-query CCDS DB by CCDS ID:57407.1Re-query CCDS DB by GeneID:170676See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 10, NCBI annotation release 38.1, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 57407.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000176204.7 ENSMUSP00000134963.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000176204.7Link to Ensembl Protein Viewer:ENSMUSP00000134963.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000176204Re-query CCDS DB by Protein ID:ENSMUSP00000134963
Original member Current member NCBI NM_001040611.1 NP_001035701.1 Accepted alive Link to Nucleotide Sequence:NM_001040611.1Link to Protein Sequence:NP_001035701.1Re-query CCDS DB by Nucleotide ID:NM_001040611Re-query CCDS DB by Protein ID:NP_001035701Link to BLAST:NP_001035701.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001035701.1 376 Q7TN75-2 376 100% 0 0

Chromosomal Locations for CCDS 57407.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 6 (NC_000072.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 4754221 4755351 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1131 nt):
ATGGCTGCTGCGGGTGGTTCCTCCAACTGCCCGCCCCCTCCCCCTCCCCCTCCTCCCAACAACAACAACA
ACAACAACACCCCAAAGAGCCCAGGCGTGCCTGACGCCGAAGATGATGATGAACGCAGACACGATGAGCT
CCCTGAAGACATCAACAACTTTGACGAAGACATGAACAGGCAGTTTGAGAATATGAACCTGCTGGATCAG
GTGGAGTTGCTTGCACAGAGCTACAGTCTGCTGGATCATTTAGATGACTTTGATGATGATGATGAAGACG
ATGACTTTGATCCAGAACCTGACCAGGATGAGCTCCCTGAGTACAGTGACGATGATGACCTGGAGCTTCA
GGGTGCTGCAGCAGCCCCTATCCCAAACTTTTTCTCCGATGATGACTGCCTTGAAGACCTTCCTGAGAAG
TTCGATGGCAACCCTGACATGCTGGGTCCTTTCATGTATCAGTGCCAGCTCTTCATGGAAAAGAGCACCA
GAGATTTCTCAGTTGACCGCATCCGTGTGTGCTTCGTGACAAGCATGCTGATCGGCCGTGCCGCCCGCTG
GGCTACTGCCAAGCTGCAAAGATGTACTTACCTGATGCACAACTACACTGCCTTTATGATGGAGCTGAAG
CATGTCTTTGAAGACCCTCAGAGACGTGAAGCTGCCAAACGCAAGATCAGACGTCTGCGCCAGGGCCCTG
GGCCTGTTGTGGACTACTCCAATGCATTCCAGATGATTGCCCAGGACCTGGATTGGACTGAGCCTGCCCT
GATGGATCAGTTCCAGGAAGGTCTCAACCCAGACATTCGCGCAGAGCTGTCTCGCCAGGAGGCCCCCAAG
ACCCTGGCTGCTCTGATTACTGCCTGTATTCACATCGAGAGAAGGCTGGCTCGTGACGCTGCTGCAAAGC
CCGATCCTTCACCCAGAGCCTTGGTGATGCCTCCAAACAGCCAGACCGATCCCACCGAGCCTGTGGGAGG
TGCCCGCATGCGCCTGTCCAAGGAAGAAAAGGAGAGACGCCGCAAAATGAATTTGTGTCTCTACTGTGGC
AATGGAGGCCATTTCGCCGACACGTGTCCAGCGAAAGCCTCCAAGAATTCGCCGCCGGGAAACTCCCCGG
CCCCGCTGTAG

Translation (376 aa):
MAAAGGSSNCPPPPPPPPPNNNNNNNTPKSPGVPDAEDDDERRHDELPEDINNFDEDMNRQFENMNLLDQ
VELLAQSYSLLDHLDDFDDDDEDDDFDPEPDQDELPEYSDDDDLELQGAAAAPIPNFFSDDDCLEDLPEK
FDGNPDMLGPFMYQCQLFMEKSTRDFSVDRIRVCFVTSMLIGRAARWATAKLQRCTYLMHNYTAFMMELK
HVFEDPQRREAAKRKIRRLRQGPGPVVDYSNAFQMIAQDLDWTEPALMDQFQEGLNPDIRAELSRQEAPK
TLAALITACIHIERRLARDAAAKPDPSPRALVMPPNSQTDPTEPVGGARMRLSKEEKERRRKMNLCLYCG
NGGHFADTCPAKASKNSPPGNSPAPL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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