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Report for CCDS57591.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
57591.1 Public Mus musculus 7 D7Ertd443e 23 108 98 CCDS HistoryNCBI Gene:71007Re-query CCDS DB by CCDS ID:57591.1Re-query CCDS DB by GeneID:71007See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 10, NCBI annotation release 38.1, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 57591.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000172947.7 ENSMUSP00000134479.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000172947.7Link to Ensembl Protein Viewer:ENSMUSP00000134479.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000172947Re-query CCDS DB by Protein ID:ENSMUSP00000134479
Original member Current member NCBI NM_001199941.1 NP_001186870.1 Accepted alive Link to Nucleotide Sequence:NM_001199941.1Link to Protein Sequence:NP_001186870.1Re-query CCDS DB by Nucleotide ID:NM_001199941Re-query CCDS DB by Protein ID:NP_001186870Link to BLAST:NP_001186870.1

Chromosomal Locations for CCDS 57591.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 134266613 134266651 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 134266738 134266837 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 134270194 134270257 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 134293228 134293405 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 134294965 134295143 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 134298116 134298400 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 134348712 134349828 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 134357995 134358086 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 134364731 134364752 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2076 nt):
ATGATTAAACTGTCTGGGGAAGGATTACTGCACACGTGCTATAGTACAAATGATCAAATCGCCCTTAAAA
ACCTGCAGTCTGATGTTACAGAGAGGAAGTTGGACTTCTCCAAGGAGACACTGGCATCACAGAACACAAG
AATGATATCACCTGTGGTCATTTCCCGGCTGATTGATGAAAAGAAATCTATGGAAAATGGAGCAATATTG
CCACAAGCCATTGCTCAGCCTCAGCTGTGTCCCACAAAGCCAGCTTTGGCCAGGCGCGATGGAGTGAGCA
TGCACAGGCGATTTGCTTTATCTCCAGACAGACTGGGAATTTTGACTCCATCAGATGATCAAGGACTGGA
GACAGAACCGCTGTCTACAGGGGACAATCTAGGCAAAGGTTCCCACAGCGGTTTCTCGTCTATCACCATT
ACTGCCCGACGTGTGGGCCCTCCAGCCAGCAGCTTGGTATGGGACACTTTTAGGGACCCACTGTGTCCCA
AGTGCAAAGCCAAGGATGCTCTGTTCCAAGAGCCCCCAGTTCTGGCTGGTGATGCCCATCTCTGTCAGCA
CAATAGACCCTTCACCTGTACAGAGTCCCCCAGCAATGGCTCCGTAGAGGGGATGAAGGTTTTCCAGGCT
CACTCAAGGCTGAGTGCAAGGCAGGACTACTGGGTCACCCACACGAATGACAATGAGGACAGTTTTTCTT
CAGACAATTCACCATCGAGAAAAGTCCCACTGGTGTTCAGTTCTTGTGTCCACTTCCGGGTGTCTCAGCA
GTGTCCCAATGCCATTTACTATTTGGACAAGTCTCTTTCTGTTCCCCTTGAGCGACCTCAAATTGCTAGC
CCCAAAATGCACAGGTCTGTCCTGTCTCTCAGCCTCCGCTGTAGTTCCCACCAGTTAACAGCAGATGGAG
TAGACAGCTCAGCTAATGGAGAGCCAATCAGCACAGCTCTATCACAGGAACTCTCGGAGGGAAAGCAGGA
CCTCCTAGGTCCACAATGGGGCCAGCCACAAGGTGGTCACTGGAAGGAGAGCCCAGCATTGGTGCCAGTA
CATTTGGGGAGTGGCACATGCCCTCGGACTGGCTCCCCTCCACTGGAAAATGTCAAATTTGCAGACGTGG
GAAGGAACCAGGTCCCAGTACGAAAGGAGAAAGAGGACCATGCAACATGTACCAGTAGCAGCCACACCAA
CCAACTCTCCATCCATATTCCCGGCTGGAGTTACAGGGCTGAAACAAAAGTACTTTCTGGAAGCAAGAAG
CAGCAGCAAGAAGCACAAAGAACTCTTCCTGCTTTCCCAGTGGGACAGAAGACCATTAAACACTTCCCTC
CTGAAGGGGACAGTTCACCAAGCAGTGATGGTCAACCTAGCATCCTTTCAGAGTCCAATGAGAGGCAACA
CCCATACTTCATGATACCCAGAGTCCCTCTGCCTGGGTTTTATTGCCCTTTACAAACTGGGTGTGCCTCT
CTGCAGGAAGATGGTGCTGTTCAGATAGAAACACACTTCCCCAAAGATTACACGTGCTGTGACTTGGTTG
TAAAACTAAAGGAATGTGAGAAGAACGAAGACCCCACTGTCACCCCTGAGCCCTCACCAGCAACCCCCTC
TCCATCAACCCCAGAGGGAGCACAGAGCTCTGACCCATCAGAAGATAGTTACGAGCCTCTGCTGGCAAGT
TCTATGACTTTGCAGGAAGCACTGGAAGTCCATAGACCTCAGTTCATTTCTCGCTCACAAGAACGGCTGC
AAAAGCTTAAGCGCATGGTACAGCAAAGGAAAACCCAACAAAAGGAGAGCCTGGGGCAGAAGCAGAGCCT
ACTTCCTGTCCGCGCCAACAAGAAGCAGTTCACCATTCCCCATCCTCTTAGTGATAACTTGTTCAAACCC
AAAGAAAGATGCATTTCAGAGAAGGAGATGCATATGAGATCTAAAAGAATCTATAATAATTTGCCGGAAG
TTAAAAAGAAAAAAGAAGAGCAGAAGAAAAGAATGATCTTACAGAGTAACCGGCTCCGAGCAGAAGTCTT
CAAAAAGCAATTACTGGACCAGCTCCTTCAAAGGAATGCAGTTTGA

Translation (691 aa):
MIKLSGEGLLHTCYSTNDQIALKNLQSDVTERKLDFSKETLASQNTRMISPVVISRLIDEKKSMENGAIL
PQAIAQPQLCPTKPALARRDGVSMHRRFALSPDRLGILTPSDDQGLETEPLSTGDNLGKGSHSGFSSITI
TARRVGPPASSLVWDTFRDPLCPKCKAKDALFQEPPVLAGDAHLCQHNRPFTCTESPSNGSVEGMKVFQA
HSRLSARQDYWVTHTNDNEDSFSSDNSPSRKVPLVFSSCVHFRVSQQCPNAIYYLDKSLSVPLERPQIAS
PKMHRSVLSLSLRCSSHQLTADGVDSSANGEPISTALSQELSEGKQDLLGPQWGQPQGGHWKESPALVPV
HLGSGTCPRTGSPPLENVKFADVGRNQVPVRKEKEDHATCTSSSHTNQLSIHIPGWSYRAETKVLSGSKK
QQQEAQRTLPAFPVGQKTIKHFPPEGDSSPSSDGQPSILSESNERQHPYFMIPRVPLPGFYCPLQTGCAS
LQEDGAVQIETHFPKDYTCCDLVVKLKECEKNEDPTVTPEPSPATPSPSTPEGAQSSDPSEDSYEPLLAS
SMTLQEALEVHRPQFISRSQERLQKLKRMVQQRKTQQKESLGQKQSLLPVRANKKQFTIPHPLSDNLFKP
KERCISEKEMHMRSKRIYNNLPEVKKKKEEQKKRMILQSNRLRAEVFKKQLLDQLLQRNAV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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