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Report for CCDS57968.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
57968.1 Public Homo sapiens 1 PLEKHG5 24 110 108 CCDS HistoryNCBI Gene:57449Re-query CCDS DB by CCDS ID:57968.1Re-query CCDS DB by GeneID:57449See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 57968.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000535355.6 ENSP00000441445.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000535355.6Link to Ensembl Protein Viewer:ENSP00000441445.1Re-query CCDS DB by Nucleotide ID:ENST00000535355Re-query CCDS DB by Protein ID:ENSP00000441445
Original member NCBI NM_001265593.1 NP_001252522.1 Updated not alive Link to Nucleotide Sequence:NM_001265593.1Link to Protein Sequence:NP_001252522.1Re-query CCDS DB by Nucleotide ID:NM_001265593Re-query CCDS DB by Protein ID:NP_001252522
Current member NCBI NM_001265593.2 NP_001252522.1 Accepted alive Link to Nucleotide Sequence:NM_001265593.2Link to Protein Sequence:NP_001252522.1Re-query CCDS DB by Nucleotide ID:NM_001265593Re-query CCDS DB by Protein ID:NP_001252522Link to BLAST:NP_001252522.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001252522.1 1075 O94827-7 1075 99.907% 0 1

Chromosomal Locations for CCDS 57968.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 6467563 6467572 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 6467825 6468586 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 6469042 6469241 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 6469335 6469450 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 6469544 6469676 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 6470236 6470355 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 6470506 6470643 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 6470735 6470884 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 6470990 6471100 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 6471488 6471637 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 6471758 6471808 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 6472527 6472622 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 6472986 6473174 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 6473251 6473454 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 6474013 6474164 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 6474451 6474587 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 6475047 6475138 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 6475462 6475522 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 6475931 6476036 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 6477529 6477658 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 6485324 6485443 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3228 nt):
ATGGGGACAGGACCCGGTGTCTCCGGACGCCTAGCAGCCTCCAGGCCGGGCCCGGGGCTGCCCCTCCGGG
ACTCGGAGCCCTCCTGGGCCGGGGGTCGTGCCCGCGACGGTGATAGCCAGGTATGTCACCACGCCGACTG
CCAGCAGCTGCACCGCCGGGGGCCCCTCAACCTCTGCGAGGCCTGTGACAGCAAGTTCCACAGCACCATG
CATTATGATGGGCATGTCCGCTTCGACCTTCCCCCACAAGGCTCTGTGCTGGCCCGGAACGTGTCCACCC
GGTCATGCCCGCCGCGCACCAGCCCCGCAGTGGACTTGGAGGAGGAGGAGGAGGAGAGCTCTGTGGATGG
CAAAGGGGACCGGAAGAGCACAGGCCTGAAACTCTCCAAGAAGAAAGCAAGGAGGAGACACACGGATGAC
CCAAGCAAGGAATGCTTCACTCTGAAATTTGACCTGAATGTGGACATTGAGACAGAGATCGTCCCAGCCA
TGAAGAAGAAGTCACTGGGGGAGGTGCTGCTGCCTGTATTTGAAAGGAAGGGCATTGCGCTGGGCAAAGT
GGACATCTACCTGGACCAGTCCAACACACCCCTGTCCCTCACCTTCGAGGCCTACAGGTTCGGGGGACAC
TACCTTCGTGTCAAAGCCCCAGCCAAGCCTGGAGATGAGGGCAAGGTGGAGCAGGGCATGAAGGACTCCA
AGTCCCTGAGTTTGCCGATTCTGCGGCCAGCTGGGACCGGGCCCCCCGCCCTGGAGCGTGTGGACGCCCA
GAGCCGCCGGGAGAGCCTGGACATCTTGGCCCCTGGCCGCCGCCGCAAGAACATGTCGGAGTTCCTGGGG
GAGGCGAGCATCCCCGGGCAGGAGCCCCCCACGCCCTCCAGCTGCTCTCTGCCCAGCGGCAGCAGTGGCA
GCACCAACACTGGCGACAGCTGGAAGAACCGGGCGGCCAGTCGCTTCAGCGGCTTTTTCAGCTCCGGCCC
CAGCACCAGCGCCTTTGGCCGGGAGGTAGACAAGATGGAGCAGCTGGAGGGCAAGCTGCACACCTACAGC
CTCTTCGGGCTGCCCAGGCTGCCCCGGGGGCTGCGCTTCGACCATGACTCCTGGGAGGAGGAGTACGATG
AAGACGAGGATGAGGACAATGCCTGCCTGAGGCTGGAGGACAGCTGGCGGGAGCTCATTGATGGGCATGA
GAAGCTGACCCGGCGGCAGTGCCACCAGCAGGAGGCGGTGTGGGAGCTGCTGCACACGGAGGCCTCCTAC
ATCAGGAAACTGCGGGTGATCATCAACCTGTTCCTGTGCTGCCTCCTGAACCTGCAAGAGTCAGGGCTGC
TGTGTGAGGTGGAGGCGGAGCGCCTGTTCAGCAACATCCCGGAGATCGCGCAGCTGCACCGCAGGCTGTG
GGCTAGCGTGATGGCGCCGGTGCTGGAGAAGGCGCGGCGCACGCGAGCGCTGCTACAGCCCGGGGACTTC
CTCAAAGGCTTCAAGATGTTCGGCTCGCTCTTCAAGCCCTACATCCGCTACTGCATGGAGGAGGAGGGCT
GCATGGAGTACATGCGCGGCCTGCTGCGCGACAACGACCTCTTCCGGGCCTACATCACGTGGGCGGAGAA
GCACCCACAGTGCCAGAGGCTGAAGCTGAGCGACATGCTGGCCAAACCCCACCAGCGGCTCACCAAGTAC
CCGCTGCTGCTCAAGTCGGTGCTGAGGAAGACCGAGGAGCCGCGCGCCAAGGAGGCCGTCGTCGCCATGA
TCGGCTCCGTGGAGCGCTTCATCCACCACGTGAACGCGTGCATGCGGCAGCGGCAGGAGCGGCAGCGGCT
GGCGGCCGTGGTGAGCCGCATCGACGCCTACGAGGTGGTGGAAAGCAGCAGCGACGAAGTGGACAAGCTC
CTGAAGGAATTTCTGCACCTGGACTTGACAGCGCCCATCCCTGGCGCCTCCCCGGAGGAGACGCGGCAGC
TGCTGCTGGAGGGGAGCCTGAGGATGAAGGAGGGGAAGGACAGCAAGATGGATGTGTACTGCTTCCTCTT
CACGGATCTGCTGTTGGTGACCAAAGCAGTGAAGAAGGCAGAGAGGACCAGGGTCATCAGGCCACCCCTG
CTCGTGGACAAGATTGTGTGCCGGGAGCTACGGGACCCTGGGTCCTTCCTCCTTATCTACCTGAATGAGT
TTCACAGTGCTGTAGGGGCCTACACGTTCCAGGCCAGTGGCCAGGCCTTGTGCCGTGGCTGGGTGGACAC
CATTTACAATGCCCAGAACCAGCTGCAACAGCTGCGTGCACAGGAGCCCCCAGGCAGTCAGCAGCCCCTG
CAGAGCCTGGAAGAGGAGGAGGATGAGCAGGAGGAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGAAGGCG
AGGACAGTGGCACTTCAGCTGCCAGCTCCCCTACCATCATGCGGAAAAGCAGCGGCAGCCCCGACTCTCA
GCACTGTGCCTCAGATGGCTCCACGGAGACCCTGGCCATGGTTGTGGTAGAGCCTGGGGACACGCTGTCC
TCCCCCGAGTTCGACAGCGGTCCTTTCAGCTCCCAGTCTGATGAGACCTCTCTCAGCACCACTGCCTCAT
CTGCCACGCCCACCAGTGAGCTGCTGCCCCTGGGTCCGGTGGACGGCCGCTCCTGCTCCATGGACTCTGC
CTACGGCACCCTCTCCCCAACCTCCTTACAAGACTTTGTGGCCCCAGGCCCAATGGCAGAGCTAGTGCCT
CGGGCCCCAGAGTCCCCACGAGTTCCTTCCCCTCCACCCTCGCCCCGTCTCCGCCGCCGCACCCCTGTCC
AGCTGTTGAGCTGCCCGCCCCACCTGCTCAAGTCTAAGTCCGAGGCCAGCCTCCTCCAGCTGCTGGCAGG
GGCTGGCACCCATGGGACACCCTCTGCCCCCAGCCGCAGCCTGTCAGAGCTCTGCCTGGCTGTTCCAGCC
CCAGGTATTAGGACTCAGGGCTCCCCTCAGGAAGCTGGGCCCAGCTGGGATTGCCGAGGGGCCCCTAGCC
CTGGCAGCGGTCCTGGGCTAGTCGGCTGCCTGGCCGGGGAACCTGCAGGCTCCCACAGGAAGAGGTGTGG
AGACCTGCCCTCGGGGGCCTCTCCCAGGGTCCAGCCTGAGCCCCCACCAGGGGTCTCTGCCCAGCACAGG
AAGCTGACCCTGGCCCAGCTCTACCGAATCAGGACCACCCTGCTGCTTAACTCCACGCTCACTGCCTCGG
AGGTCTGA

Translation (1075 aa):
MGTGPGVSGRLAASRPGPGLPLRDSEPSWAGGRARDGDSQVCHHADCQQLHRRGPLNLCEACDSKFHSTM
HYDGHVRFDLPPQGSVLARNVSTRSCPPRTSPAVDLEEEEEESSVDGKGDRKSTGLKLSKKKARRRHTDD
PSKECFTLKFDLNVDIETEIVPAMKKKSLGEVLLPVFERKGIALGKVDIYLDQSNTPLSLTFEAYRFGGH
YLRVKAPAKPGDEGKVEQGMKDSKSLSLPILRPAGTGPPALERVDAQSRRESLDILAPGRRRKNMSEFLG
EASIPGQEPPTPSSCSLPSGSSGSTNTGDSWKNRAASRFSGFFSSGPSTSAFGREVDKMEQLEGKLHTYS
LFGLPRLPRGLRFDHDSWEEEYDEDEDEDNACLRLEDSWRELIDGHEKLTRRQCHQQEAVWELLHTEASY
IRKLRVIINLFLCCLLNLQESGLLCEVEAERLFSNIPEIAQLHRRLWASVMAPVLEKARRTRALLQPGDF
LKGFKMFGSLFKPYIRYCMEEEGCMEYMRGLLRDNDLFRAYITWAEKHPQCQRLKLSDMLAKPHQRLTKY
PLLLKSVLRKTEEPRAKEAVVAMIGSVERFIHHVNACMRQRQERQRLAAVVSRIDAYEVVESSSDEVDKL
LKEFLHLDLTAPIPGASPEETRQLLLEGSLRMKEGKDSKMDVYCFLFTDLLLVTKAVKKAERTRVIRPPL
LVDKIVCRELRDPGSFLLIYLNEFHSAVGAYTFQASGQALCRGWVDTIYNAQNQLQQLRAQEPPGSQQPL
QSLEEEEDEQEEEEEEEEEEEEGEDSGTSAASSPTIMRKSSGSPDSQHCASDGSTETLAMVVVEPGDTLS
SPEFDSGPFSSQSDETSLSTTASSATPTSELLPLGPVDGRSCSMDSAYGTLSPTSLQDFVAPGPMAELVP
RAPESPRVPSPPPSPRLRRRTPVQLLSCPPHLLKSKSEASLLQLLAGAGTHGTPSAPSRSLSELCLAVPA
PGIRTQGSPQEAGPSWDCRGAPSPGSGPGLVGCLAGEPAGSHRKRCGDLPSGASPRVQPEPPPGVSAQHR
KLTLAQLYRIRTTLLLNSTLTASEV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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