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Report for CCDS58068.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
58068.1 Public Homo sapiens 1 OR2L5 24 110 108 CCDS HistoryNCBI Gene:81466Re-query CCDS DB by CCDS ID:58068.1Re-query CCDS DB by GeneID:81466See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 58068.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000355281.2 ENSP00000347428.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000355281.2Link to Ensembl Protein Viewer:ENSP00000347428.1Re-query CCDS DB by Nucleotide ID:ENST00000355281Re-query CCDS DB by Protein ID:ENSP00000347428
Original member Current member NCBI NM_001258284.2 NP_001245213.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001258284.2Link to Protein Sequence:NP_001245213.1Re-query CCDS DB by Nucleotide ID:NM_001258284Re-query CCDS DB by Protein ID:NP_001245213Link to BLAST:NP_001245213.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001245213.1 312 Q8NG80 312 100% 0 0

Chromosomal Locations for CCDS 58068.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 248021948 248022886 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (939 nt):
ATGGAAAATTACAATCAAACGTCAACTGATTTCATCTTATTGGGGCTGTTCCCACCATCAAAAATTGGCC
TTTTCCTCTTCATTCTCTTTGTTCTCATTTTCCTAATGGCTCTAATTGGAAACCTATCCATGATTCTTCT
CATCTTCTTGGACACCCATCTCCACACACCCATGTATTTCCTGCTTAGTCAGCTCTCCCTCATTGACCTA
AATTACATCTCTACGATTGTTCCTAAGATGGCTTCTGATTTTCTGTATGGAAACAAGTCTATCTCCTTCA
TTGGGTGTGGGATTCAGAGTTTCTTCTTCATGACTTTTGCAGGTGCAGAAGCGCTGCTCCTGACATCAAT
GGCCTATGATCGTTATGTGGCCATTTGCTTTCCTCTCCACTATCCCATCCGTATGAGCAAAAGAATGTAT
GTGCTGATGATAACAGGATCTTGGATGATAGGCTCCATCAACTCTTGTGCTCACACAGTATATGCATTCC
GTATCCCATATTGCAAGTCCAGAGCCATCAATCATTTTTTCTGTGATGTTCCAGCTATGTTGACATTAGC
CTGTACAGACACCTGGGTCTATGAGTACACAGTGTTTTTGAGCAGCACCATCTTTCTTGTGTTTCCCTTC
ACTGGCATTGCGTGTTCCTATGGCTGGGTTCTCCTTGCTGTCTACCGCATGCACTCTGCAGAAGGGAGGA
AAAAGGCCTATTCGACCTGCAGCACCCACCTCACTGTAGTAACTTTCTACTATGCACCCTTTGCTTATAC
CTATCTATGTCCAAGATCCCTGCGATCTCTGACAGAGGACAAGGTTCTGGCTGTTTTCTACACCATCCTC
ACCCCAATGCTCAACCCCATCATCTACAGCCTGAGAAACAAGGAGGTGATGGGGGCCCTGACACGAGTGA
TTCAGAATATCTTCTCGGTGAAAATGTAG

Translation (312 aa):
MENYNQTSTDFILLGLFPPSKIGLFLFILFVLIFLMALIGNLSMILLIFLDTHLHTPMYFLLSQLSLIDL
NYISTIVPKMASDFLYGNKSISFIGCGIQSFFFMTFAGAEALLLTSMAYDRYVAICFPLHYPIRMSKRMY
VLMITGSWMIGSINSCAHTVYAFRIPYCKSRAINHFFCDVPAMLTLACTDTWVYEYTVFLSSTIFLVFPF
TGIACSYGWVLLAVYRMHSAEGRKKAYSTCSTHLTVVTFYYAPFAYTYLCPRSLRSLTEDKVLAVFYTIL
TPMLNPIIYSLRNKEVMGALTRVIQNIFSVKM


Links Key
 Links to:   History report
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  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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