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Report for CCDS58635.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
58635.1 Public Homo sapiens 19 BSG 24 110 108 CCDS HistoryNCBI Gene:682Re-query CCDS DB by CCDS ID:58635.1Re-query CCDS DB by GeneID:682See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 58635.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000346916.9 ENSP00000344707.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000346916.9Link to Ensembl Protein Viewer:ENSP00000344707.4Re-query CCDS DB by Nucleotide ID:ENST00000346916Re-query CCDS DB by Protein ID:ENSP00000344707
Original member Current member EBI ENST00000573784.6 ENSP00000473393.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000573784.6Link to Ensembl Protein Viewer:ENSP00000473393.2Re-query CCDS DB by Nucleotide ID:ENST00000573784Re-query CCDS DB by Protein ID:ENSP00000473393
Original member Current member EBI ENST00000576984.3 ENSP00000473528.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000576984.3Link to Ensembl Protein Viewer:ENSP00000473528.2Re-query CCDS DB by Nucleotide ID:ENST00000576984Re-query CCDS DB by Protein ID:ENSP00000473528
Original member Current member EBI ENST00000545507.6 ENSP00000473664.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000545507.6Link to Ensembl Protein Viewer:ENSP00000473664.1Re-query CCDS DB by Nucleotide ID:ENST00000545507Re-query CCDS DB by Protein ID:ENSP00000473664
Original member Current member EBI ENST00000680065.1 ENSP00000506020.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000680065.1Link to Ensembl Protein Viewer:ENSP00000506020.1Re-query CCDS DB by Nucleotide ID:ENST00000680065Re-query CCDS DB by Protein ID:ENSP00000506020
Original member Current member NCBI NM_198590.3 NP_940992.1 Accepted alive Link to Nucleotide Sequence:NM_198590.3Link to Protein Sequence:NP_940992.1Re-query CCDS DB by Nucleotide ID:NM_198590Re-query CCDS DB by Protein ID:NP_940992Link to BLAST:NP_940992.1
Original member Current member NCBI NM_198591.4 NP_940993.2 Accepted alive Link to Nucleotide Sequence:NM_198591.4Link to Protein Sequence:NP_940993.2Re-query CCDS DB by Nucleotide ID:NM_198591Re-query CCDS DB by Protein ID:NP_940993Link to BLAST:NP_940993.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_940992.1 176 P35613-3 176 100% 0 0
NP_940993.2 176 P35613-3 176 100% 0 0

Chromosomal Locations for CCDS 58635.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 580434 580461 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 580646 580782 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 581315 581591 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 582306 582330 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 582514 582577 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (531 nt):
ATGGGCACGGCCAACATCCAGCTCCACGGGCCTCCCAGAGTGAAGGCTGTGAAGTCGTCAGAACACATCA
ACGAGGGGGAGACGGCCATGCTGGTCTGCAAGTCAGAGTCCGTGCCACCTGTCACTGACTGGGCCTGGTA
CAAGATCACTGACTCTGAGGACAAGGCCCTCATGAACGGCTCCGAGAGCAGGTTCTTCGTGAGTTCCTCG
CAGGGCCGGTCAGAGCTACACATTGAGAACCTGAACATGGAGGCCGACCCCGGCCAGTACCGGTGCAACG
GCACCAGCTCCAAGGGCTCCGACCAGGCCATCATCACGCTCCGCGTGCGCAGCCACCTGGCCGCCCTCTG
GCCCTTCCTGGGCATCGTGGCTGAGGTGCTGGTGCTGGTCACCATCATCTTCATCTACGAGAAGCGCCGG
AAGCCCGAGGACGTCCTGGATGATGACGACGCCGGCTCTGCACCCCTGAAGAGCAGCGGGCAGCACCAGA
ATGACAAAGGCAAGAACGTCCGCCAGAGGAACTCTTCCTGA

Translation (176 aa):
MGTANIQLHGPPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSS
QGRSELHIENLNMEADPGQYRCNGTSSKGSDQAIITLRVRSHLAALWPFLGIVAEVLVLVTIIFIYEKRR
KPEDVLDDDDAGSAPLKSSGQHQNDKGKNVRQRNSS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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