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Report for CCDS59103.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
59103.1 Public Homo sapiens 8 TCF24 24 110 108 CCDS HistoryNCBI Gene:100129654Re-query CCDS DB by CCDS ID:59103.1Re-query CCDS DB by GeneID:100129654See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 59103.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000563496.2 ENSP00000455444.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000563496.2Link to Ensembl Protein Viewer:ENSP00000455444.1Re-query CCDS DB by Nucleotide ID:ENST00000563496Re-query CCDS DB by Protein ID:ENSP00000455444
Original member Current member NCBI NM_001193502.2 NP_001180431.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001193502.2Link to Protein Sequence:NP_001180431.1Re-query CCDS DB by Nucleotide ID:NM_001193502Re-query CCDS DB by Protein ID:NP_001180431Link to BLAST:NP_001180431.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001180431.1 167 Q7RTU0 167 100% 0 0

Chromosomal Locations for CCDS 59103.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 66948051 66948164 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 66961376 66961765 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (504 nt):
ATGGACCGCGGCCGCCCAGCGGGCAGCCCCCTCAGCGCCAGCGCCGAGCCCGCGCCCCTGGCCGCCGCCA
TCCGCGACTCGCGTCCCGGGCGGACCGGGCCGGGGCCGGCGGGCCCTGGGGGCGGCTCGCGTTCCGGGAG
CGGGCGGCCGGCGGCGGCGAATGCGGCGCGGGAGCGCAGCCGGGTGCAGACCCTGCGGCACGCTTTCCTG
GAGCTGCAGCGCACGCTGCCGTCCGTGCCGCCCGACACCAAGCTGTCCAAGCTGGACGTGCTGCTGCTGG
CCACCACCTACATCGCGCATCTCACCCGCAGCCTGCAGGACGACGCCGAGGCGCCGGCGGACGCCGGGTT
GGGCGCCCTGCGCGGCGATGGCTACCTGCACCCGGTCAAGAAATGGCCCATGCGATCAAGATTGTACATC
GGTGCTACTGGTCAGTTTCTGAAGCATTCTGTTTCTGGAGAAAAAACAAATCATGACAACACTCCAACAG
ACTCACAGCCTTAG

Translation (167 aa):
MDRGRPAGSPLSASAEPAPLAAAIRDSRPGRTGPGPAGPGGGSRSGSGRPAAANAARERSRVQTLRHAFL
ELQRTLPSVPPDTKLSKLDVLLLATTYIAHLTRSLQDDAEAPADAGLGALRGDGYLHPVKKWPMRSRLYI
GATGQFLKHSVSGEKTNHDNTPTDSQP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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