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Report for CCDS59195.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
59195.1 Public Homo sapiens 1 MEAF6 24 110 108 CCDS HistoryNCBI Gene:64769Re-query CCDS DB by CCDS ID:59195.1Re-query CCDS DB by GeneID:64769See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 12, NCBI annotation release 104, Ensembl annotation release 71

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 59195.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000373073.8 ENSP00000362164.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000373073.8Link to Ensembl Protein Viewer:ENSP00000362164.4Re-query CCDS DB by Nucleotide ID:ENST00000373073Re-query CCDS DB by Protein ID:ENSP00000362164
Original member Current member NCBI NM_001270876.3 NP_001257805.1 Accepted alive Link to Nucleotide Sequence:NM_001270876.3Link to Protein Sequence:NP_001257805.1Re-query CCDS DB by Nucleotide ID:NM_001270876Re-query CCDS DB by Protein ID:NP_001257805Link to BLAST:NP_001257805.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001257805.1 192 Q9HAF1-4 192 100% 0 0

Chromosomal Locations for CCDS 59195.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 37493769 37493814 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 37501804 37501996 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 37509278 37509323 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 37509455 37509542 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 37513423 37513538 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 37514657 37514746 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (579 nt):
ATGGCGATGCACAACAAGGCGGCGCCGCCGCAGATCCCGGACACCCGGCGGGAGCTGGCGGAGCTCGTGA
AGCGGAAGCAGGAGCTGGCGGAAACATTGGCAAATTTGGAGCGACAGATCTATGCTTTTGAGGGAAGCTA
CCTGGAAGACACTCAGATGTATGGCAATATTATTCGTGGCTGGGATCGGTATCTGACCAACCAAAAAAAC
TCCAATAGCAAAAATGATCGAAGGAACCGGAAGTTTAAGGAAGCTGAGCGGCTCTTCAGTAAATCCTCGG
TTACCTCAGCAGCTGCAGTAAGTGCATTGGCAGGAGTTCAGGACCAGCTCATTGAAAAGAGGGAGCCAGG
AAGTGGGACGGAAAGTGACACTTCTCCAGACTTCCACAATCAGGAAAATGAGCCCAGCCAGGAGGACCCT
GAGGATCTGGATGGATCTGTGCAGGGAGTGAAACCTCAGAAGGCTGCTTCTTCTACTTCCTCAGGGAGTC
ACCACAGCAGCCATAAAAAGCGAAAGAATAAAAACCGGCACAGAATGAATGTCTCCCCCAAAACTGGCTG
GCACCAGCTTCATCTGTGA

Translation (192 aa):
MAMHNKAAPPQIPDTRRELAELVKRKQELAETLANLERQIYAFEGSYLEDTQMYGNIIRGWDRYLTNQKN
SNSKNDRRNRKFKEAERLFSKSSVTSAAAVSALAGVQDQLIEKREPGSGTESDTSPDFHNQENEPSQEDP
EDLDGSVQGVKPQKAASSTSSGSHHSSHKKRKNKNRHRMNVSPKTGWHQLHL


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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  VEGA Genome Browser

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