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Report for CCDS59366.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
59366.1 Public Homo sapiens 19 FCHO1 24 110 108 CCDS HistoryNCBI Gene:23149Re-query CCDS DB by CCDS ID:59366.1Re-query CCDS DB by GeneID:23149See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 12, NCBI annotation release 104, Ensembl annotation release 71

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 59366.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000595033.5 ENSP00000472668.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000595033.5Link to Ensembl Protein Viewer:ENSP00000472668.1Re-query CCDS DB by Nucleotide ID:ENST00000595033Re-query CCDS DB by Protein ID:ENSP00000472668
Original member Current member NCBI NM_001161359.2 NP_001154831.1 Accepted alive Link to Nucleotide Sequence:NM_001161359.2Link to Protein Sequence:NP_001154831.1Re-query CCDS DB by Nucleotide ID:NM_001161359Re-query CCDS DB by Protein ID:NP_001154831Link to BLAST:NP_001154831.1
Original member Current member NCBI NM_001384384.1 NP_001371313.1 Accepted alive Link to Nucleotide Sequence:NM_001384384.1Link to Protein Sequence:NP_001371313.1Re-query CCDS DB by Nucleotide ID:NM_001384384Re-query CCDS DB by Protein ID:NP_001371313Link to BLAST:NP_001371313.1
Original member Current member NCBI NM_001384385.1 NP_001371314.1 Accepted alive Link to Nucleotide Sequence:NM_001384385.1Link to Protein Sequence:NP_001371314.1Re-query CCDS DB by Nucleotide ID:NM_001384385Re-query CCDS DB by Protein ID:NP_001371314Link to BLAST:NP_001371314.1
Original member Current member NCBI NM_001384386.1 NP_001371315.1 Accepted alive Link to Nucleotide Sequence:NM_001384386.1Link to Protein Sequence:NP_001371315.1Re-query CCDS DB by Nucleotide ID:NM_001384386Re-query CCDS DB by Protein ID:NP_001371315Link to BLAST:NP_001371315.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001154831.1 839 O14526-3 839 100% 0 0
NP_001371313.1 839 O14526-3 839 100% 0 0
NP_001371314.1 839 O14526-3 839 100% 0 0
NP_001371315.1 839 O14526-3 839 100% 0 0

Chromosomal Locations for CCDS 59366.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 17764406 17764449 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17766669 17766810 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17770425 17770577 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17770792 17770896 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17772457 17772555 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17772645 17772741 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17774239 17774283 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17774394 17774478 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17775056 17775080 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17775456 17775513 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17775983 17776161 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17776247 17776271 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17776635 17776686 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17778137 17778228 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17778609 17778884 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17781231 17781343 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17781452 17781539 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17781712 17781820 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17783017 17783172 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17784103 17784235 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17784725 17784924 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17786574 17786629 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17787682 17787846 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17788284 17788306 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2520 nt):
ATGGCGAAACTCTCCAAGCTGGCCAGCAACGGGACCCCCATGGGGACCTTCGCCCCGCTCTGGGAGGTCT
TCCGCGTCTCCTCGGACAAGCTGGCGCTGTGCCACCTGGAACTGACACGGAAGTTACAGGATCTCATCAA
GGACGTTCTCCGCTACGGCGAGGAACAGCTCAAGACCCACAAGAAGTGCAAGGAGGAAGTGGTGAGCACC
TTGGATGCTGTGCAGGTACTCTCGGGCGTCAGCCAGCTCCTGCCCAAGTCCCGCGAGAACTACCTGAACC
GTTGCATGGACCAGGAGCGGCTGCGGAGGGAGAGTACCAGCCAGAAGGAGATGGACAAGGCGGAGACTAA
AACCAAGAAGGCGGCAGAGAGCCTGCGGCGCTCAGTGGAAAAATACAACTCAGCCCGAGCTGACTTTGAG
CAGAAGATGCTGGACTCAGCCCTGCGCTTCCAAGCCATGGAGGAGACACACCTGAGGCACATGAAGGCAC
TGCTGGGCTCATATGCTCACTCGGTGGAGGACACGCACGTGCAGATTGGGCAGGTGCATGAGGAATTTAA
GCAGAACATCGAGAACGTCAGCGTGGAGATGCTACTCAGGAAGTTTGCAGAGAGTAAGGGCACAGGCCGG
GAGAAGCCTGGACCTCTGGACTTCGAGGCATACAGTGCGGCTGCCCTGCAGGAAGCGATGAAACGTTTGC
GGGGAGCCAAGGCCTTTCGCCTTCCAGGACTAAGCCGGCGGGAGCGGGAGCCAGAGCCACCTGCAGCTGT
AGATTTCCTGGAGCCCGATTCAGGGACATGTCCAGAGGTGGATGAAGAAGGTTTCACTGTCCGGCCTGAT
GTGACCCAGAACAGCACGGCCGAGCCCTCCCGTTTCTCGTCCAGCGACTCCGACTTCGACGATGAAGAGC
CCCGCAAGTTCTATGTGCACATCAAGCCTGCCCCGGCCCGGGCTCCAGCCTGCAGCCCCGAGGCAGCAGC
GGCACAGCTCAGGGCCACCGCGGGCAGCCTCATCCTTCCTCCTGGCCCAGGGGGCACCATGAAACGCCAT
TCTTCACGGGACGCTGCTGGGAAACCCCAGAGACCTCGGTCTGCCCCCAGAACCAGCAGCTGTGCAGAGA
GATTGCAGTCAGAGGAGCAGGTGTCCAAGAACCTCTTTGGGCCGCCCCTGGAGTCAGCCTTTGACCACGA
AGATTTTACAGGCTCTAGCAGCCTGGGCTTCACCTCCAGCCCCTCCCCTTTCTCCTCCTCGTCGCCCGAA
AACGTGGAGGATTCCGGCCTGGACTCTCCGTCCCACGCGGCACCTGGCCCCTCCCCAGATTCCTGGGTCC
CCCGCCCAGGCACCCCGCAGAGCCCGCCCAGCTGTAGGGCGCCACCCCCAGAGGCCAGGGGTATCCGGGC
ACCGCCTCTGCCAGACTCGCCGCAGCCCCTCGCCTCGTCTCCAGGCCCCTGGGGGCTGGAGGCCTTGGCC
GGAGGAGACCTGATGCCTGCACCTGCTGACCCCACAGCCAGGGAGGGCCTGGCAGCCCCACCCAGGAGAC
TTCGCTCTAGGAAGGTGTCCTGCCCTCTCACACGTAGCAATGGGGACCTGTCTCGTTCCCTGAGCCCCTC
CCCACTGGGCTCTTCAGCCGCCAGCACTGCCTTGGAACGGCCCAGCTTCTTATCCCAGACAGGACACGGA
GTCTCCCGGGGTCCGAGCCCTGTGGTCCTGGGCTCCCAGGATGCCCTGCCCATAGCCACAGCCTTCACAG
AGTATGTCCACGCCTACTTCCGTGGCCACAGCCCCAGCTGCCTGGCTCGAGTAACTGGGGAGCTGACCAT
GACCTTCCCTGCTGGCATCGTGCGTGTGTTCAGCGGGACCCCACCACCACCTGTCCTCAGCTTCCGGCTT
GTACACACAACCGCTATTGAGCACTTCCAGCCCAACGCCGATCTGCTGTTCAGTGACCCCTCCCAGAGTG
ACCCTGAGACCAAAGACTTCTGGCTCAACATGGCAGCTCTGACCGAAGCCCTGCAGCGCCAGGCAGAGCA
GAACCCCACTGCCTCCTACTACAACGTGGTGCTGCTGCGATACCAGTTCTCCCGCCCGGGTCCCCAGTCT
GTGCCTCTGCAGCTCAGTGCCCACTGGCAGTGTGGAGCCACCCTCACCCAGGTCTCAGTGGAGTACGGCT
ACCGGCCCGGTGCCACGGCTGTGCCCACACCACTCACGAACGTCCAGATCCTGCTGCCTGTGGGGGAGCC
TGTGACCAACGTCCGCTTGCAGCCGGCTGCCACCTGGAACCTGGAGGAGAAGCGGCTCACTTGGAGGCTT
CCAGATGTGTCCGAGGCAGGCGGTTCTGGCCGCCTCTCTGCCAGCTGGGAGCCGCTCTCAGGGCCCAGCA
CACCCAGCCCCGTGGCTGCACAGTTCACCAGCGAGGGGACCACTCTGTCGGGCGTGGACTTGGAACTGGT
GGGCAGCGGTTACCGCATGTCGCTGGTGAAGAGGAGGTTTGCCACAGGGATGTACCTGGTGAGCTGCTGA

Translation (839 aa):
MAKLSKLASNGTPMGTFAPLWEVFRVSSDKLALCHLELTRKLQDLIKDVLRYGEEQLKTHKKCKEEVVST
LDAVQVLSGVSQLLPKSRENYLNRCMDQERLRRESTSQKEMDKAETKTKKAAESLRRSVEKYNSARADFE
QKMLDSALRFQAMEETHLRHMKALLGSYAHSVEDTHVQIGQVHEEFKQNIENVSVEMLLRKFAESKGTGR
EKPGPLDFEAYSAAALQEAMKRLRGAKAFRLPGLSRREREPEPPAAVDFLEPDSGTCPEVDEEGFTVRPD
VTQNSTAEPSRFSSSDSDFDDEEPRKFYVHIKPAPARAPACSPEAAAAQLRATAGSLILPPGPGGTMKRH
SSRDAAGKPQRPRSAPRTSSCAERLQSEEQVSKNLFGPPLESAFDHEDFTGSSSLGFTSSPSPFSSSSPE
NVEDSGLDSPSHAAPGPSPDSWVPRPGTPQSPPSCRAPPPEARGIRAPPLPDSPQPLASSPGPWGLEALA
GGDLMPAPADPTAREGLAAPPRRLRSRKVSCPLTRSNGDLSRSLSPSPLGSSAASTALERPSFLSQTGHG
VSRGPSPVVLGSQDALPIATAFTEYVHAYFRGHSPSCLARVTGELTMTFPAGIVRVFSGTPPPPVLSFRL
VHTTAIEHFQPNADLLFSDPSQSDPETKDFWLNMAALTEALQRQAEQNPTASYYNVVLLRYQFSRPGPQS
VPLQLSAHWQCGATLTQVSVEYGYRPGATAVPTPLTNVQILLPVGEPVTNVRLQPAATWNLEEKRLTWRL
PDVSEAGGSGRLSASWEPLSGPSTPSPVAAQFTSEGTTLSGVDLELVGSGYRMSLVKRRFATGMYLVSC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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