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Report for CCDS59489.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
59489.1 Public Homo sapiens 5 POU5F2 24 110 108 CCDS HistoryNCBI Gene:134187Re-query CCDS DB by CCDS ID:59489.1Re-query CCDS DB by GeneID:134187See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 12, NCBI annotation release 104, Ensembl annotation release 71

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 59489.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000606183.4 ENSP00000489796.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000606183.4Link to Ensembl Protein Viewer:ENSP00000489796.1Re-query CCDS DB by Nucleotide ID:ENST00000606183Re-query CCDS DB by Protein ID:ENSP00000489796
Original member Current member NCBI NM_153216.2 NP_694948.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_153216.2Link to Protein Sequence:NP_694948.1Re-query CCDS DB by Nucleotide ID:NM_153216Re-query CCDS DB by Protein ID:NP_694948Link to BLAST:NP_694948.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_694948.1 328 Q8N7G0 328 100% 0 0

Chromosomal Locations for CCDS 59489.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 93740577 93741563 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (987 nt):
ATGGCCGGACACAGGCCCTCAAACCACTTCTGCCCCCTTCCAGGCAGTGGTGGGGGCGGCCCCAGAGGGC
CGATGCCCCTGCGGGTTGACACTCTGACCTGGTTGAGCACCCAGGCGGCCCCTGGCAGGGTGATGGTCTG
GCCGGCAGTCAGGCCAGGGATCTGCCCAGGCCCTGACGTGTGGAGGATTCCCCTGGGTCCCCTGCCACAC
GAATTCCGGGGCTGGATAGCACCCTGCAGGCCCCGTCTTGGAGCTAGTGAGGCAGGGGACTGGTTGCGAC
GCCCCTCCGAAGGCGCCCTCCCGGGGCCCTACATTGCCCTGCGGAGCATTCCGAAGTTGCCGCCGCCAGA
GGACATCTCGGGCATACTGAAAGAGTTGCAGCAATTGGCCAAGGAGTTGAGGCAGAAGAGGTTGAGCCTA
GGGTACTCGCAGGCCGATGTGGGGATCGCTGTGGGAGCTCTGTTTGGGAAGGTGCTTAGCCAGACGACCA
TCTGCCGCTTCGAGGCCCAGCAGCTAAGCGTCGCCAACATGTGGAAGCTGCGACCACTGCTGAAAAAGTG
GCTGAAGGAAGTGGAAGCAGAGAACCTTCTGGGCTTATGCAAAATGGAGATGATCCTGCAACAGTCTGGG
AAGTGGAGACGGGCAAGCAGAGAGCGACGAATCGGAAACAGCCTGGAGAAATTCTTCCAGCGGTGCCCTA
AGCCCACACCCCAGCAAATCAGCCACATTGCTGGGTGCCTCCAGCTGCAGAAGGATGTGGTTCGAGTTTG
GTTCTATAACCGCAGCAAGATGGGCAGTCGACCAACCAATGATGCTTCCCCACGGGAGATTGTGGGGACA
GCCGGGCCTCCTTGCCCAGGAGCACCAGTGTGCTTTCACCTGGGACTGGGGCTCCCAGTGGATATCCCCC
ACTATACACGTCTCTACTCTGCAGGGGTAGCCCACTCCTCTGCCCCAGCCACCACTCTGGGCCTCCTCAG
ATTTTAG

Translation (328 aa):
MAGHRPSNHFCPLPGSGGGGPRGPMPLRVDTLTWLSTQAAPGRVMVWPAVRPGICPGPDVWRIPLGPLPH
EFRGWIAPCRPRLGASEAGDWLRRPSEGALPGPYIALRSIPKLPPPEDISGILKELQQLAKELRQKRLSL
GYSQADVGIAVGALFGKVLSQTTICRFEAQQLSVANMWKLRPLLKKWLKEVEAENLLGLCKMEMILQQSG
KWRRASRERRIGNSLEKFFQRCPKPTPQQISHIAGCLQLQKDVVRVWFYNRSKMGSRPTNDASPREIVGT
AGPPCPGAPVCFHLGLGLPVDIPHYTRLYSAGVAHSSAPATTLGLLRF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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