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Report for CCDS61602.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
61602.1 Public Homo sapiens 15 ZNF106 24 110 108 CCDS HistoryNCBI Gene:64397Re-query CCDS DB by CCDS ID:61602.1Re-query CCDS DB by GeneID:64397See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 61602.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000565611.5 ENSP00000457637.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000565611.5Link to Ensembl Protein Viewer:ENSP00000457637.1Re-query CCDS DB by Nucleotide ID:ENST00000565611Re-query CCDS DB by Protein ID:ENSP00000457637
Original member Current member NCBI NM_001284306.2 NP_001271235.1 Accepted alive Link to Nucleotide Sequence:NM_001284306.2Link to Protein Sequence:NP_001271235.1Re-query CCDS DB by Nucleotide ID:NM_001284306Re-query CCDS DB by Protein ID:NP_001271235Link to BLAST:NP_001271235.1

Chromosomal Locations for CCDS 61602.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 42417304 42417360 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 42417805 42417951 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 42421061 42421132 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 42421917 42421988 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 42422501 42422620 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 42423998 42424060 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 42424834 42425025 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 42428018 42428134 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 42435384 42435518 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 42437232 42437377 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 42438612 42438667 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 42439033 42439813 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 42442073 42442414 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 42444202 42444262 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 42444827 42444981 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 42446589 42446658 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 42448072 42448692 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3207 nt):
ATGGTACCCCTTGTTCAAAATGAACAAGAAGCCTTAGATTTGGATGGGGAACCTGATCTGTCCAGTCTAG
AAGGATTCCAGTGGGAAGGTGTTTCCATTTCCTCGTCCCCTGGCTTGGCAAGAAAGCGAAGCCTTTCTGA
GAGCAGCGTGATCATGGACAGAGCTCCTTCTGTGTATAGCTTCTTCAGTGAGGAAGGTACAGGCAAAGAA
AATGAGCCCCAGCAGATGGTTTCACCTAGTAACTCATTGAGGGCTGGACAGAGCCAGAAAGCAACCATGC
ACCTCAAACAAGAAGTGACACCTCGGGCTGCCTCCCTCCGAACAGGTGAAAGGGCTGAAAATGTTGCTAC
CCAAAGGCGACATAGTGCACAATTATCCTCTGACCATATAATACCTTTGATGCATTTGGCAAAAGACTTG
AACAGCCAGGAGAGGTCTATACCACCGTCAGAGAATCAGAATTCCCAGGAGAGTAATGGAGAGGGAAACT
GTCTGTCATCAAGCGCATCCTCAGCCCTTGCGATCTCCAGTTTAGCGGATGCAGCCACAGATAGTAGCTG
TACCTCTGGTGCTGAACAAAATGATGGCCAAAGTATTAGAAAGAAACGAAGAGCCACTGGAGATGGATCT
TCTCCTGAACTCCCAAGTCTTGAGAGAAAAAATAAAAGAAGGAAAATTAAAGGAAAAAAAGAACGTTCTC
AGGTTGACCAGCTGCTGAATATTTCTTTAAGGGAGGAAGAACTTAGTAAGTCATTGCAGTGCATGGATAA
CAATCTTCTGCAAGCCCGTGCAGCCCTTCAGACAGCTTATGTGGAAGTTCAGAGGCTACTTATGCTCAAG
CAGCAGATAACTATGGAGATGAGTGCACTGAGGACCCATAGAATACAGATTCTACAGGGATTACAAGAAA
CATATGAACCTTCTGAGCACCCAGACCAGGTTCCCTGTAGCCTCACACGAGAACGAAGGAACAGTAGATC
TCAAACATCCATTGATGCCGCACTGCTGCCCACTCCCTTTTTCCCACTTTTTCTGGAGCCTCCATCTTCC
CATGTGTCTCCATCACCCACCGGAGCCTCTCTTCAAATAACCACGTCTCCTACTTTCCAAACCCATGGCA
GTGTCCCTGCTCCAGACTCATCAGTTCAGATTAAACAAGAGCCCATGTCTCCTGAACAAGATGAGAATGT
GAATGCTGTGCCACCAAGCTCTGCCTGCAATGTGTCCAAGGAATTACTGGAAGCTAATAGAGAGATCAGT
GACAGTTGTCCAGTTTATCCAGTCATCACTGCTAGATTGTCCTTACCAGAGTCAACAGAAAGTTTCCATG
AGCCTAGCCAAGAACTGAAGTTTTCTGTGGAGCAAAGAAATACCAGAAACAGAGAAAACTCTCCCTCTTC
CCAATCAGCTGGTCTTTCTAGCATAAATAAAGAAGGGGAAGAGCCAACCAAAGGCAATAGTGGGTCTGAA
GCCTGTACCAGTTCTTTTCTAAGATTGTCTTTTGCTTCAGAAACCCCTTTGGAGAAGGAACCCCACTCTC
CAGCTGACCAGCCTGAACAACAGGCAGAATCCACTTTGACATCAGCTGAGACTAGGGGAAGCAAGAAAAA
GAAGAAACTCCGGAAGAAGAAAAGTCTACGGGCTGCCCATGTTCCTGAGAATAGTGACACTGAACAGGAT
GTTTTGACTGTTAAACCTGTAAGGAAAGTAAAAGCTGGAAAGTTAATTAAAGGGGGGAAAGTAACAACCT
CCACTTGGGAAGACAGCAGGACTGGTCGGGAGCAGGAGAGTGTCAGAGATGAGCCAGATAGTGACTCGTC
TCTGGAAGTCCTAGAAATTCCTAATCCTCAGTTAGAAGTAGTAGCCATTGATTCTTCAGAATCAGGAGAA
GAGAAACCAGACAGCCCATCTAAAAAGGATATTTGGAACTCTACAGAGCAAAACCCACTAGAAACGTCTC
GTTCTGGGTGTGATGAAGTTAGCTCTACCAGTGAAATTGGCACTCGCTATAAAGATGGCATCCCTGTAAG
TGTGGCAGAAACTCAGACTGTGATCTCCTCCATAAAAGGATCAAAGAATTCTTCAGAAATATCTTCAGAG
CCAGGAGATGATGATGAACCCACAGAAGGAAGCTTTGAGGGACACCAAGCTGCCGTAAATGCAATTCAGA
TATTTGGGAACTTGCTATATACCTGTTCAGCAGATAAAACTGTTCGGGTTTATAATCTGGTGAGTCGGAA
ATGTATTGGTGTCTTTGAGGGTCATACCTCCAAAGTTAACTGCCTCCTGGTTACTCAGACCTCCGGGAAG
AATGCTGCCCTTTACACCGGGTCCAGTGACCATACCATCCGCTGCTATAATGTTAAGAGCCGAGAGTGTG
TGGAGCAGTTACAGCTGGAAGACCGGGTCCTCTGCCTCCACAGTAGATGGCGAATCCTCTATGCGGGACT
GGCAAATGGCACTGTGGTCACCTTCAACATAAAGAACAACAAACGACTTGAGATCTTTGAATGCCATGGC
CCTCGGGCAGTCAGCTGTCTTGCTACAGCTCAGGAAGGTGCCCGAAAACTGCTGGTCGTGGGGTCTTATG
ACTGCACAATTAGTGTACGCGATGCCCGGAATGGACTGCTCCTCAGAACTCTGGAGGGCCATAGCAAAAC
CATTCTTTGCATGAAGGTGGTGAATGATCTCGTGTTCAGTGGCTCCAGTGATCAGTCAGTCCATGCTCAC
AACATTCACACTGGTGAGCTCGTGCGGATCTATAAAGGTCACAATCATGCAGTGACTGTGGTGAATATCC
TAGGAAAAGTGATGGTGACTGCTTGCCTGGATAAATTTGTTCGTGTCTATGAATTACAGTCTCATGATCG
ATTACAAGTTTATGGAGGACACAAAGACATGATTATGTGTATGACCATCCATAAAAGCATGATTTACACT
GGCTGTTATGATGGCAGTATTCAGGCCGTGAGGCTTAATCTGATGCAGAATTACCGCTGTTGGTGGCATG
GTTGCTCTCTGATATTTGGCGTTGTAGATCATTTAAAACAACACTTGCTGACCGACCACACTAATCCCAA
CTTCCAGACTCTGAAATGTCGCTGGAAGAACTGCGATGCTTTTTTCACTGCTAGGAAAGGATCCAAACAG
GATGCTGCAGGACATATTGAACGACATGCTGAAGATGACAGCAAAATTGATTCATGA

Translation (1068 aa):
MVPLVQNEQEALDLDGEPDLSSLEGFQWEGVSISSSPGLARKRSLSESSVIMDRAPSVYSFFSEEGTGKE
NEPQQMVSPSNSLRAGQSQKATMHLKQEVTPRAASLRTGERAENVATQRRHSAQLSSDHIIPLMHLAKDL
NSQERSIPPSENQNSQESNGEGNCLSSSASSALAISSLADAATDSSCTSGAEQNDGQSIRKKRRATGDGS
SPELPSLERKNKRRKIKGKKERSQVDQLLNISLREEELSKSLQCMDNNLLQARAALQTAYVEVQRLLMLK
QQITMEMSALRTHRIQILQGLQETYEPSEHPDQVPCSLTRERRNSRSQTSIDAALLPTPFFPLFLEPPSS
HVSPSPTGASLQITTSPTFQTHGSVPAPDSSVQIKQEPMSPEQDENVNAVPPSSACNVSKELLEANREIS
DSCPVYPVITARLSLPESTESFHEPSQELKFSVEQRNTRNRENSPSSQSAGLSSINKEGEEPTKGNSGSE
ACTSSFLRLSFASETPLEKEPHSPADQPEQQAESTLTSAETRGSKKKKKLRKKKSLRAAHVPENSDTEQD
VLTVKPVRKVKAGKLIKGGKVTTSTWEDSRTGREQESVRDEPDSDSSLEVLEIPNPQLEVVAIDSSESGE
EKPDSPSKKDIWNSTEQNPLETSRSGCDEVSSTSEIGTRYKDGIPVSVAETQTVISSIKGSKNSSEISSE
PGDDDEPTEGSFEGHQAAVNAIQIFGNLLYTCSADKTVRVYNLVSRKCIGVFEGHTSKVNCLLVTQTSGK
NAALYTGSSDHTIRCYNVKSRECVEQLQLEDRVLCLHSRWRILYAGLANGTVVTFNIKNNKRLEIFECHG
PRAVSCLATAQEGARKLLVVGSYDCTISVRDARNGLLLRTLEGHSKTILCMKVVNDLVFSGSSDQSVHAH
NIHTGELVRIYKGHNHAVTVVNILGKVMVTACLDKFVRVYELQSHDRLQVYGGHKDMIMCMTIHKSMIYT
GCYDGSIQAVRLNLMQNYRCWWHGCSLIFGVVDHLKQHLLTDHTNPNFQTLKCRWKNCDAFFTARKGSKQ
DAAGHIERHAEDDSKIDS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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