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Report for CCDS61641.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
61641.1 Public Homo sapiens 15 PIGB 24 110 108 CCDS HistoryNCBI Gene:9488Re-query CCDS DB by CCDS ID:61641.1Re-query CCDS DB by GeneID:9488See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 61641.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000164305.10 ENSP00000164305.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000164305.10Link to Ensembl Protein Viewer:ENSP00000164305.5Re-query CCDS DB by Nucleotide ID:ENST00000164305Re-query CCDS DB by Protein ID:ENSP00000164305
Original member Current member NCBI NM_004855.5 NP_004846.4 MANE Select Accepted alive Link to Nucleotide Sequence:NM_004855.5Link to Protein Sequence:NP_004846.4Re-query CCDS DB by Nucleotide ID:NM_004855Re-query CCDS DB by Protein ID:NP_004846Link to BLAST:NP_004846.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_004846.4 554 Q92521 554 100% 0 0

Chromosomal Locations for CCDS 61641.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 55319251 55319413 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 55320275 55320410 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 55321273 55321390 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 55327531 55327635 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 55329724 55329854 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 55333867 55334007 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 55339267 55339318 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 55340612 55340823 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 55341738 55341802 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 55350699 55350912 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 55354798 55354978 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 55355286 55355432 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1665 nt):
ATGAGGAGGCCCCTAAGCAAGTGCGGAATGGAGCCGGGGGGCGGAGATGCCAGCCTCACTTTGCATGGTC
TCCAGAACCGCTCCCACGGCAAGATAAAGCTGCGAAAGAGAAAGTCTACCTTGTACTTCAACACCCAGGA
GAAGAGCGCCAGGCGCCGCGGGGATCTTCTTGGAGAAAATATTTATCTGCTCTTGTTTACCATAGCTTTA
CGAATATTAAACTGCTTTTTAGTGCAGACAAGTTTTGTTCCAGATGAATACTGGCAGTCTCTTGAAGTTT
CACATCACATGGTTTTCAATTATGGTTATTTGACTTGGGAATGGACAGAGAGACTGAGGAGTTACACTTA
TCCCTTAATCTTTGCAAGCATTTACAAGATTCTTCATCTTTTAGGGAAAGATAGTGTTCAGTTGCTGATT
TGGATTCCTAGACTTGCCCAAGCACTTCTGTCTGCTGTAGCAGATGTGAGACTTTACTCATTAATGAAGC
AACTAGAAAATCAGGAAGTGGCAAGATGGGTGTTTTTTTGCCAGTTGTGCTCCTGGTTCACATGGTATTG
CTGTACCAGAACCCTTACAAACACCATGGAAACTGTTCTCACTATAATTGCTCTTTTCTACTATCCTTTG
GAAGGTTCAAAGTCTATGAACAGTGTCAAATACTCATCCCTGGTGGCACTTGCCTTCATAATTCGTCCCA
CAGCTGTCATTCTGTGGACACCTTTGCTCTTCAGACATTTCTGTCAAGAACCAAGAAAGCTTGATCTTAT
TCTACATCATTTTTTACCTGTAGGCTTTGTTACTTTGAGTTTGTCTCTGATGATTGATCGTATTTTTTTT
GGCCAATGGACTCTGGTTCAATTTAATTTTTTGAAATTTAACGTGCTGCAGAACTGGGGAACATTTTATG
GTTCTCATCCATGGCACTGGTACTTCAGTCAAGGATTTCCAGTTATCTTGGGTACTCACTTACCCTTCTT
TATTCATGGCTGCTATCTAGCACCAAAGAGATACCGGATACTTTTGGTGACTGTGCTGTGGACACTGCTT
GTTTATAGCATGTTGAGCCACAAAGAATTCAGGTTTATTTATCCAGTTTTACCATTCTGTATGGTGTTCT
GTGGATACTCATTAACCCACCTGAAAACATGGAAGAAACCAGCTCTAAGTTTCCTGTTTTTATCAAATTT
GTTCCTCGCCCTTTATACTGGTTTAGTTCATCAACGAGGTACTCTTGATGTCATGAGTCATATTCAAAAA
GTTTGTTACAACAATCCCAATAAATCTTCAGCTTCAATATTTATAATGATGCCTTGCCACTCTACTCCTT
ATTACAGCCATGTTCACTGCCCACTTCCCATGAGATTTCTCCAGTGCCCGCCAGACCTGACTGGAAAAAG
TCATTATCTTGATGAAGCAGATGTATTTTACCTAAATCCCTTAAACTGGTTACATAGAGAGTTTCATGAT
GATGCATCATTGCCTACTCACTTGATCACCTTCAGCATTTTGGAAGAGGAAATAAGCGCTTTCCTAATTT
CAAGCAATTATAAAAGAACTGCTGTTTTCTTCCACACTCACTTGCCAGAGGGTCGAATTGGAAGTCACAT
ATATGTCTATGAACGGAAGTTAAAAGGGAAATTCAACATGAAGATGAAATTCTGA

Translation (554 aa):
MRRPLSKCGMEPGGGDASLTLHGLQNRSHGKIKLRKRKSTLYFNTQEKSARRRGDLLGENIYLLLFTIAL
RILNCFLVQTSFVPDEYWQSLEVSHHMVFNYGYLTWEWTERLRSYTYPLIFASIYKILHLLGKDSVQLLI
WIPRLAQALLSAVADVRLYSLMKQLENQEVARWVFFCQLCSWFTWYCCTRTLTNTMETVLTIIALFYYPL
EGSKSMNSVKYSSLVALAFIIRPTAVILWTPLLFRHFCQEPRKLDLILHHFLPVGFVTLSLSLMIDRIFF
GQWTLVQFNFLKFNVLQNWGTFYGSHPWHWYFSQGFPVILGTHLPFFIHGCYLAPKRYRILLVTVLWTLL
VYSMLSHKEFRFIYPVLPFCMVFCGYSLTHLKTWKKPALSFLFLSNLFLALYTGLVHQRGTLDVMSHIQK
VCYNNPNKSSASIFIMMPCHSTPYYSHVHCPLPMRFLQCPPDLTGKSHYLDEADVFYLNPLNWLHREFHD
DASLPTHLITFSILEEEISAFLISSNYKRTAVFFHTHLPEGRIGSHIYVYERKLKGKFNMKMKF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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