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Report for CCDS62531.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
62531.1 Public Homo sapiens 19 ZNF559 24 110 108 CCDS HistoryNCBI Gene:84527Re-query CCDS DB by CCDS ID:62531.1Re-query CCDS DB by GeneID:84527See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 62531.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000587557.5 ENSP00000468153.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000587557.5Link to Ensembl Protein Viewer:ENSP00000468153.2Re-query CCDS DB by Nucleotide ID:ENST00000587557Re-query CCDS DB by Protein ID:ENSP00000468153
Original member Current member NCBI NM_001202406.1 NP_001189335.1 Accepted alive Link to Nucleotide Sequence:NM_001202406.1Link to Protein Sequence:NP_001189335.1Re-query CCDS DB by Nucleotide ID:NM_001202406Re-query CCDS DB by Protein ID:NP_001189335Link to BLAST:NP_001189335.1

Chromosomal Locations for CCDS 62531.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 9324179 9324228 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 9324695 9324780 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 9338494 9338582 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 9339193 9339319 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 9341102 9341184 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 9341695 9343068 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1809 nt):
ATGCGCATAACGGCCGCCATCTTAACAGCGCGTTCCCGTTGGCGTCTGAGGAACAGCATCTCTGCCTTCC
TGTTCACGGTGACCTTCGCTTGGTGTCCTCCTGGCCTCAGCAACCTGACAATTCTGTCGTGTCCCGATCA
TCTTTCTCAAGATGTTTTCTGTCTTCATGAGTCAAAATTTGAAGAGGAAAGGATGGTGGCTGGGTGGTTG
ACAAATTACTCTCAGGACTCAGTGACCTTTGAGGATGTGGCTGTGGACTTCACCCAGGAGGAGTGGACTT
TGCTGGATCAAACTCAGAGAAACTTATACAGAGATGTGATGCTGGAGAACTATAAGAATCTAGTTGCAGT
AGATTGGGAGAGTCATATTAATACCAAATGGTCAGCACCTCAGCAGAATTTTTTGCAGGGGAAAACATCC
AGTGTGGTGGAAATGGAGAGAAACCATTTTGGAGAGGAACTGTTTGACTTTAACCAATGTGAAAAAGCCT
TGAGTGAACACTCATGCCTTAAGACTCACAGGAGAACTTACTTTAGAAAGAAAACCTGTGAGTGTAATCA
ATGTGAAAAAGCCTTCAGAAAACCCTCTATCTTTACTTTACACAAGAAAACTGATATCGGAGAGGAACTT
CCTAACTGTAATCAATGTGAAACAGCCTTCAGCCAACATCTACATCTTGTTTGCAAGAAAACTAGCCAAA
ATCTACATCTTGTTTGCAAGAAAACTCACACTCAAGAGAAACCATATAAATGCAGTGACTGTGAAAAAGG
CTTACCTTCCTCCTCACACCTCAGAGAATGTGTAAGAATTTATGGTGGAGAGAGACCATATACTCATAAG
GAGTATGTCGAAACCTTTTCTCATTCTACAGCCCTTTTTGTACACATGCAAACTCAAGATGGAGAAAAAT
TCTATGAATGTAAAGCATGTGGGAAACCCTTCACTGAGTCGTCATATCTTACTCAACATTTAAGAACTCA
TAGTAGAGTGTTACCTATAGAACATAAGAAATTTGGCAAAGCCTTTGCTTTTTCCCCAGATCTTGCTAAA
CATATAAGACTTAGAACTAGAGGAAAACACTATGTTTGTAATGAATGTGGCAAAGAATTTACTTGTTTCT
CAAAACTCAACATTCACATAAGGGTTCACACTGGAGAAAAACCGTATGAGTGCAACAAATGTGGGAAAGC
CTTCACTGATTCATCAGGTCTTATAAAACACAGGCGAACTCACACTGGAGAAAAGCCTTATGAATGTAAG
GAATGTGGGAAAGCTTTTGCTAACTCTTCACATCTTACTGTACATATGAGAACTCACACTGGTGAGAAGC
CTTATCAATGTAAGGAATGTGGAAAAGCCTTTATTAATTCCTCTTCCTTTAAAAGTCACATGCAGACTCA
TCCTGGTGTAAAACCCTATGACTGTCAACAGTGTGGGAAAGCCTTCATTCGATCCTCATTTCTTATTCGA
CATTTGAGAAGTCACAGTGCAGAAAGGCCTTTTGAATGTGAGGAATGTGGGAAAGCCTTTAGATACTCCT
CGCACCTTAGTCAACATAAAAGAATACATACAGGGGAGAGGCCATATAAATGTCAAAAGTGTGGGCAAGC
CTTCAGTATCTCATCAGGCCTTACAGTACACATGAGAACTCACACTGGTGAACGGCCCTTTGAATGTCAG
GAATGTGGGAAAGCCTTTACTCGGTCCACATATCTTATTCGACATCTAAGAAGTCATAGTGTGGAGAAAC
CATATAAGGAATGTGGGCAAACCTTTAGTAATTCCTCATGCCTTACTGAATGTGTGTGA

Translation (602 aa):
MRITAAILTARSRWRLRNSISAFLFTVTFAWCPPGLSNLTILSCPDHLSQDVFCLHESKFEEERMVAGWL
TNYSQDSVTFEDVAVDFTQEEWTLLDQTQRNLYRDVMLENYKNLVAVDWESHINTKWSAPQQNFLQGKTS
SVVEMERNHFGEELFDFNQCEKALSEHSCLKTHRRTYFRKKTCECNQCEKAFRKPSIFTLHKKTDIGEEL
PNCNQCETAFSQHLHLVCKKTSQNLHLVCKKTHTQEKPYKCSDCEKGLPSSSHLRECVRIYGGERPYTHK
EYVETFSHSTALFVHMQTQDGEKFYECKACGKPFTESSYLTQHLRTHSRVLPIEHKKFGKAFAFSPDLAK
HIRLRTRGKHYVCNECGKEFTCFSKLNIHIRVHTGEKPYECNKCGKAFTDSSGLIKHRRTHTGEKPYECK
ECGKAFANSSHLTVHMRTHTGEKPYQCKECGKAFINSSSFKSHMQTHPGVKPYDCQQCGKAFIRSSFLIR
HLRSHSAERPFECEECGKAFRYSSHLSQHKRIHTGERPYKCQKCGQAFSISSGLTVHMRTHTGERPFECQ
ECGKAFTRSTYLIRHLRSHSVEKPYKECGQTFSNSSCLTECV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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