NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
The CCDS database will be unavailable on Tuesday, December 17, 2024, starting at 8:00 a.m. EST for up to 60 minutes.
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS63269.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
63269.1 Public Homo sapiens 20 CTNNBL1 24 110 108 CCDS HistoryNCBI Gene:56259Re-query CCDS DB by CCDS ID:63269.1Re-query CCDS DB by GeneID:56259See the combined annotation on chromosome 20 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 63269.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000628103.2 ENSP00000487198.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000628103.2Link to Ensembl Protein Viewer:ENSP00000487198.1Re-query CCDS DB by Nucleotide ID:ENST00000628103Re-query CCDS DB by Protein ID:ENSP00000487198
Original member Current member NCBI NM_001281495.2 NP_001268424.1 Accepted alive Link to Nucleotide Sequence:NM_001281495.2Link to Protein Sequence:NP_001268424.1Re-query CCDS DB by Nucleotide ID:NM_001281495Re-query CCDS DB by Protein ID:NP_001268424Link to BLAST:NP_001268424.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001268424.1 536 Q8WYA6-4 536 100% 0 0

Chromosomal Locations for CCDS 63269.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 20 (NC_000020.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20See the combined annotation on chromosome 20 in Sequence Viewer

Chromosome Start Stop Links
20 37732930 37733067 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 37737378 37737484 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 37746468 37746607 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 37757559 37757656 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 37765197 37765290 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 37767953 37768044 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 37777345 37777417 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 37777654 37777712 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 37779187 37779335 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 37802867 37803048 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 37840102 37840199 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 37842339 37842419 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 37859899 37860036 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 37860272 37860344 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 37871925 37872013 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1611 nt):
ATGCGTCGGAAACAAACTGGTACTCGAGAACGCGGCCGCTATCGGGAAGAAGAAATGACTGTGGTGGAGG
AAGCGGATGATGACAAAAAAAGGCTGCTGCAGATTATTGACAGAGATGGGGAAGAGGAAGAGGAAGAGGA
GGAGCCATTGGATGAAAGCTCAGTGAAGAAAATGATCCTCACATTTGAAAAGAGATCATATAAAAACCAA
GAATTGCGGATTAAGTTTCCAGACAATCCAGAGAAGTTCATGGAATCCGAGCTGGACCTAAATGACATCA
TTCAGGAGATGCACGTGGTGGCCACCATGCCAGACCTGTACCACCTTCTGGTGGAGCTGAATGCTGTACA
GTCGCTTCTCGGCTTGCTCGGACACGATAATACAGATGTGTCCATAGCTGTGGTCGATTTGCTTCAGGAA
TTAACAGATATAGACACCCTCCATGAGAGTGAAGAGGGAGCAGAAGTGCTCATCGATGCTCTGGTGGATG
GGCAGGTGGTAGCACTGCTGGTACAGAATCTGGAGCGCCTGGATGAGTCTGTGAAAGAGGAGGCAGATGG
CGTCCACAACACTCTGGCTATTGTGGAAAACATGGCTGAGTTCCGGCCTGAGATGTGTACAGAGGGTGCC
CAGCAGGGTCTTCTACAGTGGCTGTTGAAGAGGCTGAAGGCAAAGATGCCTTTTGATGCCAACAAACTGT
ATTGCAGTGAAGTGCTGGCCATATTGCTCCAGGACAATGATGAAAACAGGGAATTGCTTGGGGAGCTGGA
TGGAATCGATGTGCTTCTTCAGCAGTTATCCGTGTTTAAAAGACACAATCCCAGCACGGCTGAGGAGCAG
GAGATGATGGAGAATCTGTTTGATTCCCTCTGCTCCTGTCTAATGCTTAGTTCCAATCGTGAGCGCTTCC
TGAAGGGCGAGGGTCTTCAGCTGATGAATCTCATGCTCAGGGAAAAGAAGATCTCCCGGAGCAGTGCCCT
GAAAGTGCTGGACCATGCCATGATTGGCCCCGAAGGCACAGACAACTGCCATAAGTTTGTTGACATTCTT
GGCTTACGAACCATCTTTCCCCTCTTTATGAAATCTCCCAGGAAGATCAAGAAAGTGGGAACCACTGAGA
AGGAACATGAAGAGCATGTCTGTTCGATCCTGGCTTCCCTCCTGCGGAACCTGAGAGGGCAGCAGCGGAC
CCGGCTTCTGAATAAATTCACTGAAAATGACAGTGAGAAGGTTGACAGACTAATGGAGTTGCATTTTAAA
TATCTGGGTGCAATGCAGGTGGCGGACAAGAAGATTGAAGGGGAAAAACACGACATGGTCCGGCGAGGAG
AGATCATCGACAATGACACCGAGGAGGAGTTCTACCTCCGGCGCCTGGATGCGGGGCTCTTTGTTCTCCA
GCACATCTGCTACATCATGGCCGAGATCTGCAATGCCAATGTCCCCCAGATTCGCCAGAGGGTTCACCAG
ATCCTAAACATGCGAGGAAGCTCCATCAAAATTGTCAGGCATATCATCAAGGAGTATGCAGAGAACATCG
GGGACGGCCGGAGCCCGGAGTTCCGGGAGAACGAGCAAAAGCGCATCCTGGGCTTGCTGGAGAACTTCTA
G

Translation (536 aa):
MRRKQTGTRERGRYREEEMTVVEEADDDKKRLLQIIDRDGEEEEEEEEPLDESSVKKMILTFEKRSYKNQ
ELRIKFPDNPEKFMESELDLNDIIQEMHVVATMPDLYHLLVELNAVQSLLGLLGHDNTDVSIAVVDLLQE
LTDIDTLHESEEGAEVLIDALVDGQVVALLVQNLERLDESVKEEADGVHNTLAIVENMAEFRPEMCTEGA
QQGLLQWLLKRLKAKMPFDANKLYCSEVLAILLQDNDENRELLGELDGIDVLLQQLSVFKRHNPSTAEEQ
EMMENLFDSLCSCLMLSSNRERFLKGEGLQLMNLMLREKKISRSSALKVLDHAMIGPEGTDNCHKFVDIL
GLRTIFPLFMKSPRKIKKVGTTEKEHEEHVCSILASLLRNLRGQQRTRLLNKFTENDSEKVDRLMELHFK
YLGAMQVADKKIEGEKHDMVRRGEIIDNDTEEEFYLRRLDAGLFVLQHICYIMAEICNANVPQIRQRVHQ
ILNMRGSSIKIVRHIIKEYAENIGDGRSPEFRENEQKRILGLLENF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH