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Report for CCDS63323.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
63323.1 Public Homo sapiens 20 OSBPL2 24 110 108 CCDS HistoryNCBI Gene:9885Re-query CCDS DB by CCDS ID:63323.1Re-query CCDS DB by GeneID:9885See the combined annotation on chromosome 20 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 63323.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000439951.6 ENSP00000397602.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000439951.6Link to Ensembl Protein Viewer:ENSP00000397602.2Re-query CCDS DB by Nucleotide ID:ENST00000439951Re-query CCDS DB by Protein ID:ENSP00000397602
Original member Current member EBI ENST00000645520.1 ENSP00000495166.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000645520.1Link to Ensembl Protein Viewer:ENSP00000495166.1Re-query CCDS DB by Nucleotide ID:ENST00000645520Re-query CCDS DB by Protein ID:ENSP00000495166
Original member Current member NCBI NM_001278649.3 NP_001265578.1 Accepted alive Link to Nucleotide Sequence:NM_001278649.3Link to Protein Sequence:NP_001265578.1Re-query CCDS DB by Nucleotide ID:NM_001278649Re-query CCDS DB by Protein ID:NP_001265578Link to BLAST:NP_001265578.1

Chromosomal Locations for CCDS 63323.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 20 (NC_000020.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20See the combined annotation on chromosome 20 in Sequence Viewer

Chromosome Start Stop Links
20 62272143 62272259 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 62273309 62273406 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 62279157 62279339 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 62281058 62281165 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 62281790 62281879 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 62284046 62284169 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 62286583 62286711 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 62291703 62291793 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 62293785 62293957 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1113 nt):
ATGCCAATCGCCTTCAACGAGCCTCTGAGCTTCTTGCAGCGGATCACGGAGTACATGGAGCACGTGTACC
TC
ATCCACAGGGCCTCCTGCCAGCCCCAGCCCCTGGAGAGGATGCAGTCTGTGGCTGCTTTTGCTGTTTC
G
GCTGTGGCTTCCCAGTGGGAGAGGACCGGCAAACCATTTAATCCACTCTTGGGAGAAACGTATGAATTA
ATC
AGGGAAGATTTAGGATTCAGATTTATATCGGAACAGGTCAGTCACCACCCCCCCATCAGTGCGTTCC
AC
TCGGAAGGTCTCAACCATGACTTCCTGTTCCATGGCTCCATCTACCCCAAGCTCAAGTTCTGGGGCAA
A
AGCGTGGAGGCGGAGCCCCGAGGCACCATCACCCTGGAGCTGCTCAAACATAATGAAGCCTACACCTGG
ACC
AACCCCACCTGCTGCGTCCACAACGTCATCATCGGGAAGCTGTGGATAGAGCAGTATGGGACAGTGG
AG
ATTTTAAACCACAGAACTGGACATAAGTGTGTGCTTCACTTTAAACCGTGTGGATTATTTGGAAAAGA
A
CTTCACAAGGTGGAAGGACACATTCAAGACAAAAACAAAAAGAAGCTCTTTATGATCTATGGCAAATGG
ACG
GAATGTTTGTGGGGCATAGATCCTGTTTCGTATGAATCCTTCAAGAAGCAGGAGAGGAGAGGTGACC
AC
CTGAGAAAGGCCAAGCTGGATGAAGACTCCGGGAAGGCTGACAGCGACGTGGCTGACGACGTGCCTGT
G
GCCCAGGAGACCGTGCAGGTCATTCCTGGCAGCAAGCTGCTCTGGAGGATCAACACCCGGCCCCCCAAC
TCT
GCCCAGATCTGGCCAGCCAGGAGAAGGAGCGGCTGGAGGAGAAGCAGAGAGAAGCACGGAGGGAGCG
GG
CCAAGGAGGAGGCAGAGTGGCAGACGAGGTGGTTCTACCCAGGCAATAACCCCTACACTGGGACCCCC
G
ACTGGTTGTATGCAGGGGATTACTTTGAGCGGAATTTCTCCGACTGCCCAGATATCTACTGAGGGCCTG
GAG
GGGCCTGGGGCCCGGGACCGGAGGCTGACGAGGCTGGACTTCCTCGAGTGGCCACTGTGA


Translation (370 aa):
MPIAFNEPLSFLQRITEYMEHVYLIHRASCQPQPLERMQSVAAFAVSAVASQWERTGKPFNPLLGETYEL
I
REDLGFRFISEQVSHHPPISAFHSEGLNHDFLFHGSIYPKLKFWGKSVEAEPRGTITLELLKHNEAYTW
T
NPTCCVHNVIIGKLWIEQYGTVEILNH
RTGHKCVLHFKPCGLFGKELHKVEGHIQDKNKKKLFMIYGKW
T
ECLWGIDPVSYESFKKQERRGDHLRKAKL
DEDSGKADSDVADDVPVAQETVQVIPGSKLLWRINTRPPN
S
AQ
IWPARRRSGWRRSREKHGGSGPRRRQSGRRGGSTQAITPTLGPPTGCMQGITLSGISPTAQISTEGL
E
GPGARDRRLTRLDFLEWPL




Links Key
 Links to:   History report
  BLAST report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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