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Report for CCDS63405.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
63405.1 Public Homo sapiens 22 TANGO2 24 110 108 CCDS HistoryNCBI Gene:128989Re-query CCDS DB by CCDS ID:63405.1Re-query CCDS DB by GeneID:128989See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 63405.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000401833.5 ENSP00000384827.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000401833.5Link to Ensembl Protein Viewer:ENSP00000384827.1Re-query CCDS DB by Nucleotide ID:ENST00000401833Re-query CCDS DB by Protein ID:ENSP00000384827
Original member Current member EBI ENST00000456048.5 ENSP00000403645.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000456048.5Link to Ensembl Protein Viewer:ENSP00000403645.2Re-query CCDS DB by Nucleotide ID:ENST00000456048Re-query CCDS DB by Protein ID:ENSP00000403645
Original member Current member NCBI NM_001283129.3 NP_001270058.1 Accepted alive Link to Nucleotide Sequence:NM_001283129.3Link to Protein Sequence:NP_001270058.1Re-query CCDS DB by Nucleotide ID:NM_001283129Re-query CCDS DB by Protein ID:NP_001270058Link to BLAST:NP_001270058.1
Original member Current member NCBI NM_001322143.2 NP_001309072.1 Accepted alive Link to Nucleotide Sequence:NM_001322143.2Link to Protein Sequence:NP_001309072.1Re-query CCDS DB by Nucleotide ID:NM_001322143Re-query CCDS DB by Protein ID:NP_001309072Link to BLAST:NP_001309072.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001270058.1 317 Q6ICL3-4 317 100% 0 0
NP_001309072.1 317 Q6ICL3-4 317 100% 0 0

Chromosomal Locations for CCDS 63405.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 20036916 20037094 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 20043355 20043443 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 20052465 20052584 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 20053437 20053551 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 20055943 20056013 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 20061530 20061683 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 20063338 20063442 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 20064542 20064662 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (954 nt):
ATGCCACCCAAGCTGCTGTGTGCAGGAAGGTGTGTGGGCCAGGACGGGGCTGCACAGGCCTGGCACTGCC
CTCCAGGACAGGGTCACTCAGTGTGGGATGCTGTCAGAATGCCTCTCGGGGCGGGGACTCCAGTCAATGT
ACAAAGACGTGAAGACTCAGCCACAGAAGGCAGCCACAGGCTCATCTTGGCAGCCAACAGGGATGAATTC
TACAGCCGACCCTCCAAGTTAGCTGACTTCTGGGGGAACAACAACGAGATCCTCAGTGGGCTGGACATGG
AGGAAGGCAAGGAAGGAGGCACATGGCTGGGCATCAGCACACGTGGCAAGCTGGCAGCACTCACCAACTA
CCTGCAGCCGCAGCTGGACTGGCAGGCCCGAGGGCGAGGTGAACTTGTCACCCACTTTCTGACCACTGAC
GTGGACAGCTTGTCCTACCTGAAGAAGGTCTCTATGGAGGGCCATCTGTACAATGGCTTCAACCTCATAG
CAGCCGACCTGAGCACAGCAAAGGGAGACGTCATTTGCTACTATGGGAACCGAGGGGAGCCTGATCCTAT
CGTTTTGACGCCAGGCACCTACGGGCTGAGCAACGCGCTGCTGGAGACTCCCTGGAGGAAGCTGTGCTTT
GGGAAGCAGCTCTTCCTGGAGGCTGTGGAACGGAGCCAGGCGCTGCCCAAGGATGTGCTCATCGCCAGCC
TCCTGGATGTGCTCAACAATGAAGAGGCGCAGCTGCCAGACCCGGCCATCGAGGACCAGGGTGGGGAGTA
CGTGCAGCCCATGCTGAGCAAGTACGCGGCTGTGTGCGTGCGCTGCCCTGGCTACGGCACCAGAACCAAC
ACTATCATCCTGGTAGATGCGGACGGCCACGTGACCTTCACTGAGCGTAGCATGATGGACAAGGACCTCT
CCCACTGGGAGACCAGAACCTATGAGTTCACACTGCAGAGCTAA

Translation (317 aa):
MPPKLLCAGRCVGQDGAAQAWHCPPGQGHSVWDAVRMPLGAGTPVNVQRREDSATEGSHRLILAANRDEF
YSRPSKLADFWGNNNEILSGLDMEEGKEGGTWLGISTRGKLAALTNYLQPQLDWQARGRGELVTHFLTTD
VDSLSYLKKVSMEGHLYNGFNLIAADLSTAKGDVICYYGNRGEPDPIVLTPGTYGLSNALLETPWRKLCF
GKQLFLEAVERSQALPKDVLIASLLDVLNNEEAQLPDPAIEDQGGEYVQPMLSKYAAVCVRCPGYGTRTN
TIILVDADGHVTFTERSMMDKDLSHWETRTYEFTLQS


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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