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Report for CCDS63406.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
63406.1 Public Homo sapiens 22 TANGO2 24 110 108 CCDS HistoryNCBI Gene:128989Re-query CCDS DB by CCDS ID:63406.1Re-query CCDS DB by GeneID:128989See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 63406.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000434570.6 ENSP00000391262.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000434570.6Link to Ensembl Protein Viewer:ENSP00000391262.2Re-query CCDS DB by Nucleotide ID:ENST00000434570Re-query CCDS DB by Protein ID:ENSP00000391262
Original member Current member NCBI NM_001283215.3 NP_001270144.1 Accepted alive Link to Nucleotide Sequence:NM_001283215.3Link to Protein Sequence:NP_001270144.1Re-query CCDS DB by Nucleotide ID:NM_001283215Re-query CCDS DB by Protein ID:NP_001270144Link to BLAST:NP_001270144.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001270144.1 198 Q6ICL3-6 198 100% 0 0

Chromosomal Locations for CCDS 63406.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 20036916 20037094 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 20043355 20043443 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 20052465 20052584 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 20053437 20053551 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 20055943 20056013 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 20064542 20064564 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (597 nt):
ATGCCACCCAAGCTGCTGTGTGCAGGAAGGTGTGTGGGCCAGGACGGGGCTGCACAGGCCTGGCACTGCC
CTCCAGGACAGGGTCACTCAGTGTGGGATGCTGTCAGAATGCCTCTCGGGGCGGGGACTCCAGTCAATGT
ACAAAGACGTGAAGACTCAGCCACAGAAGGCAGCCACAGGCTCATCTTGGCAGCCAACAGGGATGAATTC
TACAGCCGACCCTCCAAGTTAGCTGACTTCTGGGGGAACAACAACGAGATCCTCAGTGGGCTGGACATGG
AGGAAGGCAAGGAAGGAGGCACATGGCTGGGCATCAGCACACGTGGCAAGCTGGCAGCACTCACCAACTA
CCTGCAGCCGCAGCTGGACTGGCAGGCCCGAGGGCGAGGTGAACTTGTCACCCACTTTCTGACCACTGAC
GTGGACAGCTTGTCCTACCTGAAGAAGGTCTCTATGGAGGGCCATCTGTACAATGGCTTCAACCTCATAG
CAGCCGACCTGAGCACAGCAAAGGGAGACGTCATTTGCTACTATGGGAACCGAGGGGAGCCTGATCCTAT
CGTTTTGACGCCAGAACCAACACTATCATCCTGGTAG

Translation (198 aa):
MPPKLLCAGRCVGQDGAAQAWHCPPGQGHSVWDAVRMPLGAGTPVNVQRREDSATEGSHRLILAANRDEF
YSRPSKLADFWGNNNEILSGLDMEEGKEGGTWLGISTRGKLAALTNYLQPQLDWQARGRGELVTHFLTTD
VDSLSYLKKVSMEGHLYNGFNLIAADLSTAKGDVICYYGNRGEPDPIVLTPEPTLSSW


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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