NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS6365.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6365.1 Public Homo sapiens 8 DNAAF11 24 110 108 CCDS HistoryNCBI Gene:23639Re-query CCDS DB by CCDS ID:6365.1Re-query CCDS DB by GeneID:23639See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6365.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000620350.5 ENSP00000484634.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000620350.5Link to Ensembl Protein Viewer:ENSP00000484634.1Re-query CCDS DB by Nucleotide ID:ENST00000620350Re-query CCDS DB by Protein ID:ENSP00000484634
Original member Current member NCBI NM_012472.6 NP_036604.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_012472.6Link to Protein Sequence:NP_036604.2Re-query CCDS DB by Nucleotide ID:NM_012472Re-query CCDS DB by Protein ID:NP_036604Link to BLAST:NP_036604.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_036604.2 466 Q86X45-1 466 100% 0 0

Chromosomal Locations for CCDS 6365.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 132572306 132572480 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 132583694 132583779 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 132610166 132610261 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 132611294 132611363 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 132615038 132615097 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 132622611 132622688 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 132625272 132625454 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 132632740 132632963 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 132637935 132638107 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 132656830 132656907 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 132661460 132661627 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 132675484 132675493 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1401 nt):
ATGGGCTGGATCACAGAAGATCTTATTAGACGGAATGCTGAACACAACGACTGTGTCATTTTTTCCCTGG
AGGAACTCTCGTTGCATCAGCAAGAAATAGAAAGACTAGAACACATTGATAAATGGTGCCGGGATTTAAA
AATTCTCTATCTTCAAAATAATCTTATTGGGAAAATTGAAAATGTTAGCAAACTCAAGAAACTTGAATAT
TTGAATTTAGCTTTAAACAACATTGAAAAAATAGAAAACTTGGAAGGATGTGAAGAGCTGGCAAAACTTG
ACCTGACTGTGAATTTCATTGGAGAGCTGAGCAGCATTAAAAACTTGCAGCACAATATCCATCTGAAGGA
GCTCTTTCTCATGGGGAACCCATGTGCTTCCTTTGACCACTATAGGGAGTTCGTGGTAGCAACTCTTCCA
CAATTAAAGTGGTTGGATGGTAAAGAAATAGAGCCTTCAGAAAGGATTAAGGCATTGCAGGACTATTCAG
TAATTGAACCACAAATCAGAGAGCAGGAAAAAGATCACTGTCTTAAACGAGCCAAACTCAAGGAAGAGGC
TCAGAGGAAACACCAAGAAGAGGATAAAAATGAAGACAAGAGAAGTAACGCAGGCTTTGATGGACGTTGG
TACACAGACATCAATGCTACTCTTTCCTCTTTAGAGAGCAAAGACCACCTACAGGCACCAGACACAGAGG
AACACAACACAAAGAAATTAGACAACAGTGAAGATGACTTGGAATTCTGGAATAAGCCCTGTTTGTTTAC
TCCTGAATCAAGATTGGAAACTCTTAGACACATGGAAAAACAACGGAAGAAACAGGAAAAATTAAGTGAA
AAAAAGAAGAAAGTGAAACCACCCAGGACTTTGATCACTGAAGATGGGAAAGCCCTAAATGTGAATGAGC
CCAAAATTGACTTCTCTTTGAAAGATAACGAAAAGCAGATCATCCTGGACCTTGCTGTCTATAGGTATAT
GGATACCTCTTTAATCGATGTTGATGTGCAACCAACTTACGTGCGAGTAATGATCAAAGGAAAGCCATTT
CAGCTTGTCCTTCCTGCAGAAGTGAAACCCGATAGTAGTTCTGCTAAAAGATCTCAGACAACGGGTCATT
TGGTCATCTGCATGCCCAAGGTAGGAGAAGTAATCACAGGTGGTCAGCGAGCATTCAAATCTATGAAAAC
TACCTCGGACAGGAGCAGAGAACAAACAAATACAAGAAGCAAGCACATGGAGAAACTAGAAGTAGACCCT
AGCAAGCACTCATTCCCTGATGTGACTAACATAGTTCAAGAGAAAAAACACACACCCAGAAGACGACCTG
AACCCAAAATTATACCAAGTGAGGAAGACCCAACCTTTGAAGACAACCCTGAAGTGCCTCCGCTGATTTG
A

Translation (466 aa):
MGWITEDLIRRNAEHNDCVIFSLEELSLHQQEIERLEHIDKWCRDLKILYLQNNLIGKIENVSKLKKLEY
LNLALNNIEKIENLEGCEELAKLDLTVNFIGELSSIKNLQHNIHLKELFLMGNPCASFDHYREFVVATLP
QLKWLDGKEIEPSERIKALQDYSVIEPQIREQEKDHCLKRAKLKEEAQRKHQEEDKNEDKRSNAGFDGRW
YTDINATLSSLESKDHLQAPDTEEHNTKKLDNSEDDLEFWNKPCLFTPESRLETLRHMEKQRKKQEKLSE
KKKKVKPPRTLITEDGKALNVNEPKIDFSLKDNEKQIILDLAVYRYMDTSLIDVDVQPTYVRVMIKGKPF
QLVLPAEVKPDSSSAKRSQTTGHLVICMPKVGEVITGGQRAFKSMKTTSDRSREQTNTRSKHMEKLEVDP
SKHSFPDVTNIVQEKKHTPRRRPEPKIIPSEEDPTFEDNPEVPPLI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH