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Report for CCDS6379.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6379.1 Public Homo sapiens 8 CHRAC1 24 110 108 CCDS HistoryNCBI Gene:54108Re-query CCDS DB by CCDS ID:6379.1Re-query CCDS DB by GeneID:54108See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6379.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000220913.10 ENSP00000220913.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000220913.10Link to Ensembl Protein Viewer:ENSP00000220913.5Re-query CCDS DB by Nucleotide ID:ENST00000220913Re-query CCDS DB by Protein ID:ENSP00000220913
Original member Current member NCBI NM_017444.6 NP_059140.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_017444.6Link to Protein Sequence:NP_059140.1Re-query CCDS DB by Nucleotide ID:NM_017444Re-query CCDS DB by Protein ID:NP_059140Link to BLAST:NP_059140.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_059140.1 131 Q9NRG0 131 100% 0 0

Chromosomal Locations for CCDS 6379.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 140511500 140511646 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 140514369 140514495 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 140515126 140515247 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (396 nt):
ATGGCGGACGTGGTCGTGGGTAAAGACAAGGGCGGGGAGCAGCGGCTCATCTCGCTGCCTCTATCCCGCA
TCCGGGTCATCATGAAGAGCTCCCCCGAGGTGTCCAGCATCAACCAGGAGGCGTTGGTGCTCACGGCCAA
GGCCACGGAGCTCTTTGTTCAATGCCTAGCCACCTATTCCTACAGACACGGCAGTGGAAAGGAAAAGAAA
GTACTGACTTACAGTGATTTAGCAAACACTGCACAGCAATCAGAAACTTTTCAGTTTCTTGCAGATATAT
TACCAAAGAAGATTTTAGCTAGTAAATACCTGAAAATGCTTAAAGAGGAAAAGAGGGAAGAAGATGAGGA
GAATGACAATGATAATGAAAGTGACCATGATGAAGCTGACTCCTAA

Translation (131 aa):
MADVVVGKDKGGEQRLISLPLSRIRVIMKSSPEVSSINQEALVLTAKATELFVQCLATYSYRHGSGKEKK
VLTYSDLANTAQQSETFQFLADILPKKILASKYLKMLKEEKREEDEENDNDNESDHDEADS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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