NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS6427.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6427.1 Public Homo sapiens 8 KIFC2 24 110 108 CCDS HistoryNCBI Gene:90990Re-query CCDS DB by CCDS ID:6427.1Re-query CCDS DB by GeneID:90990See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 6427.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000301332.3 ENSP00000301332.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000301332.3Link to Ensembl Protein Viewer:ENSP00000301332.2Re-query CCDS DB by Nucleotide ID:ENST00000301332Re-query CCDS DB by Protein ID:ENSP00000301332
Original member Current member NCBI NM_145754.5 NP_665697.1 Accepted alive Link to Nucleotide Sequence:NM_145754.5Link to Protein Sequence:NP_665697.1Re-query CCDS DB by Nucleotide ID:NM_145754Re-query CCDS DB by Protein ID:NP_665697Link to BLAST:NP_665697.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_665697.1 838 Q96AC6-1 838 100% 0 0

Chromosomal Locations for CCDS 6427.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 144466420 144466518 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 144466760 144466838 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 144466959 144467110 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 144467203 144467341 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 144467485 144467630 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 144467714 144467779 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 144467859 144467987 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 144468329 144468406 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 144468536 144468650 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 144468725 144468834 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 144469271 144469379 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 144469490 144469647 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 144471942 144472046 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 144472138 144472259 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 144472361 144472484 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 144472577 144472706 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 144472795 144473450 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2517 nt):
ATGTACGCCTTTTACTCGTTGCTCATCTACATCTTCTACAGCCTCTTCCGCAGGGATGGTGGCGCCGCGG
CGGCCGCGGAGCCCGGGGACCCCGCCCAGAGAGCCCGCAAGCCCCGGGGTCGCCGGCGCCCAGACCTGCC
CGCGCCAGAGCTGTGGACCGAGCTGACCGGCCTGGCCGCCAGCTCCGAGCCTGAGGATGGGTCGGAAGGC
GCAGCCGAGGGCCGCGCGGCCGCGGTGTCCCTGGAAGAGGCCCTACTGCGCCTCGCCGAGTTCCTCTCCG
TCCAGCTGGGGGCGGAAGAGAGCTGCGGGGGCCCGGCGGACCTGGGCCAGTCTGGCGAGGTCCCCTCACT
GTTGACAGTGACCAGTCAGCTCTTGGCCCTTCTGGCATGGCTTCGAAGCCCCAGGGGGAGGCAGGCCCTG
CTCCAGGGGACTCAGCCAGCCCCTCGGGTCCGGCCCCCCTCTCCAGATGGATCCACATCCCAAGAAGAAA
GCCCTTCCCACTTCACCGCAGTCCCAGGCGAGCCACTGGGGGATGAGACCCAGGGACAGCAGCCCCTCCA
GTTGGAGGAGGATCAGAGGGCGTGGCAGCGGCTGGAGCAGCTCATCCTGGGACAGCTGGAGGAGCTGAAG
CAGCAGCTGGAACAGCAGGAGGAGGAGTTGGGTCGACTGCGCCTGGGCGTGGGGGCGACGGACTCAGAGA
AAAGGGTTCAGCATCTGACTCTGGAGAACGAGGCCCTGAAGCAGAGCCTGAGTCTCATGCGGGACCTCCT
GCTGCACTGGGGCCCCGGGCCCCCCATCAGGGCTCCGCAGGAGGAGGCAGAGGCATTGCTAGAGCTCCAG
GGCCGGCTTCAGGAGGCCCAAGACACCACAGAAGCCCTCCGAGCCCAGCTGGGGGTGCAGGAGGTGCAGC
TGCAGGGCCTTCAAGGGGCCCTCCAGCAGCTCCAGCAGGAGACGGAGCAGAACTGCAGGCGTGAGCTACA
GCAGATGCATGGGCAGCTGGCAGGACTTCGGGCACGGATGGCCAGCCTGCGTCAGGGCTGCGGGGACCTC
CGAGGTTTGGTCAGCACCTTTACCCAGAGCTGTCAGGGTTCGCTGAGTGAGGCCCGGGGCCAGGTGTCCT
GGGCCTTGGGGGCACTGTCATCTGGAGGGCCTGGCACTCAGCTCCCTGAGGGGCAGCAAGGGCCCCCAGC
CGGATGCCCAGGGCGGCTGCCAGAACTCAAGGGAAATATCCGTGTGCTGTGTCGGCTGAGGCCAGGGACA
TCTTCTAGCCTTGTGAGTGTGGAGCCTGGCCCAGGGGGCACCGTCACCACCTGCTACCGGGGGCGCCATC
GTCGATTCCGCCTAGACTGGGTCTTCCCTCCAGACGCCAGCCAGGAGGAGGTCTTCAGAGAGCTGGAACC
TGCGGTGCTGTCCTGCCTCCGAGGCTACAGCGTCTGCATCTTCACCTATGGCCAGACAGGCACCGGGAAG
ACCTACAGCATGGAGGGCCCTCCTGAGGACCCCGGCATAGTTCCTAGGGCGCTGCAGTCGCTGTTCCGGG
AGATGGGGGCCGGCCGGCAGCACCGGGTGACACTCAGCATGGTGGAGATCTACAATGAGGCTGTCAGGGA
CCTCCTTGCTCCAGGGCCTCCCGAGCGCCTGGCCGTGAGGCAGGGCCCAGAAGGCCAGGGCGGGATCCAG
GTGGCTGGCCTCACCCACTGGGACGTGCCCAACCTGGAGACATTGCACCAGATGCTGAAACTGGGGAGGA
GCAACCGGGCCACCGCCGCCACCGCCATGAACCAGCGCAGCTCCCGCTCGCATGCCCTGGTCACGCTGAC
GCTGCGCGCGGCGTCTCCACCGCGCGCTCCAGGCACCGCAGGCACGCTGCACCTGGTGGACCTGGCGGGA
TCCGAACGCGCACGGAAGGCAGGGGCGGCCGGCCCGCCGCGGGGAGACCCAGACGGCGCCCGGCGCCTGC
GGGAGGCCCAGACCATAAACCGCTCGCTGCTGGCGCTAGGAGGCGTGATGGCCGCACTGCGGGCCCACCG
GCCGCACGTGCCCTTCCGCGACTCGCAGCTCACGCGACTGCTGCAGCCGGCGCTGGGCCCAGGCACCACC
GCGGTGCTGCTGCTGCAGGTGGGCGCCGGGGCGGGGCAGGTGTGTGCGTGCCGGTCGCCGCCCACCCGGG
CCCGCCCACCCGCGCCTCTTGCCCGCAGATCTCCACGCGGCCGGAGGATCTCGGGGAGACAGTCTGCTCC
CTCAAGTTCGCCGACCGAGTGGGTCAAGTGGAGCTGGGGCCAGCCCGGCGCCGCAGGGTCCCGCGCTCCT
CCGGGACGCCTTCTTCCCTCAGCACCGACACTCCGCTCACCGGGACCCCCTGCACCCCTACGCCGTCCCC
TGGCAGTCCTCCATGCCCCAGTCCCGACAACGGCTCGGGCTCGGCTCTCGCGCCCGCAGAGGGCCTGCCC
CTCTAGTCCTGGGTCGCGGCCCTGCCCATGGGGTCTCAGGCCAGGTCTCTGCTGGCAGAGGCGGTAG

Translation (838 aa):
MYAFYSLLIYIFYSLFRRDGGAAAAAEPGDPAQRARKPRGRRRPDLPAPELWTELTGLAASSEPEDGSEG
AAEGRAAAVSLEEALLRLAEFLSVQLGAEESCGGPADLGQSGEVPSLLTVTSQLLALLAWLRSPRGRQAL
LQGTQPAPRVRPPSPDGSTSQEESPSHFTAVPGEPLGDETQGQQPLQLEEDQRAWQRLEQLILGQLEELK
QQLEQQEEELGRLRLGVGATDSEKRVQHLTLENEALKQSLSLMRDLLLHWGPGPPIRAPQEEAEALLELQ
GRLQEAQDTTEALRAQLGVQEVQLQGLQGALQQLQQETEQNCRRELQQMHGQLAGLRARMASLRQGCGDL
RGLVSTFTQSCQGSLSEARGQVSWALGALSSGGPGTQLPEGQQGPPAGCPGRLPELKGNIRVLCRLRPGT
SSSLVSVEPGPGGTVTTCYRGRHRRFRLDWVFPPDASQEEVFRELEPAVLSCLRGYSVCIFTYGQTGTGK
TYSMEGPPEDPGIVPRALQSLFREMGAGRQHRVTLSMVEIYNEAVRDLLAPGPPERLAVRQGPEGQGGIQ
VAGLTHWDVPNLETLHQMLKLGRSNRATAATAMNQRSSRSHALVTLTLRAASPPRAPGTAGTLHLVDLAG
SERARKAGAAGPPRGDPDGARRLREAQTINRSLLALGGVMAALRAHRPHVPFRDSQLTRLLQPALGPGTT
AVLLLQVGAGAGQVCACRSPPTRARPPAPLARRSPRGRRISGRQSAPSSSPTEWVKWSWGQPGAAGSRAP
PGRLLPSAPTLRSPGPPAPLRRPLAVLHAPVPTTARARLSRPQRACPSSPGSRPCPWGLRPGLCWQRR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH