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Report for CCDS64688.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
64688.1 Public Homo sapiens 7 TMEM120A 24 110 108 CCDS HistoryNCBI Gene:83862Re-query CCDS DB by CCDS ID:64688.1Re-query CCDS DB by GeneID:83862See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 64688.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000493111.7 ENSP00000473983.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000493111.7Link to Ensembl Protein Viewer:ENSP00000473983.1Re-query CCDS DB by Nucleotide ID:ENST00000493111Re-query CCDS DB by Protein ID:ENSP00000473983
Original member Current member NCBI NM_031925.3 NP_114131.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_031925.3Link to Protein Sequence:NP_114131.1Re-query CCDS DB by Nucleotide ID:NM_031925Re-query CCDS DB by Protein ID:NP_114131Link to BLAST:NP_114131.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_114131.1 343 Q9BXJ8-1 343 100% 0 0

Chromosomal Locations for CCDS 64688.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 75987172 75987285 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 75987360 75987428 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 75987538 75987602 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 75987718 75987810 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 75987923 75987984 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 75988083 75988148 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 75988252 75988341 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 75988421 75988516 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 75989165 75989224 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 75992144 75992260 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 75992439 75992557 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 75994490 75994570 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1032 nt):
ATGCAGCCCCCGCCCCCGGGCCCGCTGGGCGACTGCCTGCGGGACTGGGAGGATCTACAGCAGGACTTCC
AGAACATCCAGGAGACCCATCGGCTCTACCGCCTGAAGCTGGAGGAGCTGACCAAACTTCAGAACAATTG
CACCAGCTCCATCACGCGGCAGAAGAAGCGGCTCCAGGAGCTGGCCCTCGCCCTGAAGAAATGCAAACCC
TCCCTCCCAGCAGAGGCCGAGGGGGCCGCACAGGAGCTGGAGAACCAGATGAAAGAGCGCCAAGGCCTCT
TCTTTGACATGGAGGCCTATTTGCCTAAGAAGAATGGATTGTACCTGAGCCTGGTTCTGGGGAACGTCAA
CGTCACGCTCCTGAGCAAGCAGGCTAAGTTTGCCTACAAGGACGAGTATGAGAAGTTCAAGCTCTACCTC
ACCATCATCCTCATCCTCATCTCCTTCACTTGCCGCTTCCTGCTCAACTCCAGGGTGACAGATGCTGCCT
TCAACTTCCTGCTGGTCTGGTACTACTGCACCCTGACCATCCGGGAGAGCATCCTCATCAACAACGGCTC
CCGGATCAAAGGCTGGTGGGTGTTCCATCACTACGTGTCCACCTTCCTGTCGGGAGTCATGCTGACGTGG
CCCGACGGTCTCATGTACCAGAAATTCCGGAACCAATTCCTCTCCTTTTCCATGTACCAGAGCTTCGTGC
AGTTTCTCCAGTACTACTACCAGAGCGGCTGCCTCTACCGCCTGCGGGCGCTGGGCGAGCGGCACACCAT
GGACCTCACTGTGGAGGGCTTCCAGTCCTGGATGTGGCGGGGCCTCACCTTCCTGCTGCCTTTTCTTTTC
TTTGGACACTTCTGGCAGCTTTTTAACGCGCTGACGTTGTTCAACCTGGCCCAGGACCCTCAGTGCAAGG
AGTGGCAGGTGCTTATGTGCGGCTTTCCCTTCCTCCTCCTTTTCCTCGGCAATTTCTTCACCACCCTGAG
GGTTGTGCACCACAAGTTTCACAGTCAGCGGCACGGGAGCAAGAAGGATTGA

Translation (343 aa):
MQPPPPGPLGDCLRDWEDLQQDFQNIQETHRLYRLKLEELTKLQNNCTSSITRQKKRLQELALALKKCKP
SLPAEAEGAAQELENQMKERQGLFFDMEAYLPKKNGLYLSLVLGNVNVTLLSKQAKFAYKDEYEKFKLYL
TIILILISFTCRFLLNSRVTDAAFNFLLVWYYCTLTIRESILINNGSRIKGWWVFHHYVSTFLSGVMLTW
PDGLMYQKFRNQFLSFSMYQSFVQFLQYYYQSGCLYRLRALGERHTMDLTVEGFQSWMWRGLTFLLPFLF
FGHFWQLFNALTLFNLAQDPQCKEWQVLMCGFPFLLLFLGNFFTTLRVVHHKFHSQRHGSKKD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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