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Report for CCDS698.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
698.1 Public Homo sapiens 1 CTBS 24 110 108 CCDS HistoryNCBI Gene:1486Re-query CCDS DB by CCDS ID:698.1Re-query CCDS DB by GeneID:1486See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 698.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000370630.6 ENSP00000359664.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000370630.6Link to Ensembl Protein Viewer:ENSP00000359664.4Re-query CCDS DB by Nucleotide ID:ENST00000370630Re-query CCDS DB by Protein ID:ENSP00000359664
Original member Current member NCBI NM_004388.3 NP_004379.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_004388.3Link to Protein Sequence:NP_004379.1Re-query CCDS DB by Nucleotide ID:NM_004388Re-query CCDS DB by Protein ID:NP_004379Link to BLAST:NP_004379.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_004379.1 385 Q01459 385 100% 0 0

Chromosomal Locations for CCDS 698.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 84554999 84555199 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 84563257 84563418 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 84563735 84563832 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 84565841 84566012 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 84569931 84570139 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 84570582 84570720 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 84574239 84574415 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1158 nt):
ATGTCCCGGCCGCAGCTTCGACGCTGGCGCCTCGTCTCTAGCCCGCCGAGCGGCGTCCCGGGTCTAGCGC
TGCTGGCGCTGCTGGCGCTGCTGGCGCTGCGGCTCGCGGCCGGGACCGACTGCCCATGCCCGGAGCCTGA
GCTCTGCCGCCCGATTCGCCACCATCCAGATTTCGAGGTCTTTGTGTTTGATGTTGGACAGAAAACTTGG
AAATCTTATGATTGGTCACAGATTACAACTGTGGCAACATTTGGAAAATATGACTCAGAACTTATGTGCT
ACGCTCATTCAAAAGGAGCCAGAGTAGTACTTAAAGGAGATGTATCCTTAAAGGATATCATTGATCCTGC
TTTCAGAGCATCCTGGATAGCTCAAAAACTTAATTTGGCCAAAACACAATATATGGATGGAATTAATATA
GATATAGAGCAAGAAGTTAATTGTTTATCACCTGAATATGATGCATTAACTGCTTTAGTCAAAGAAACTA
CAGACTCTTTCCATCGTGAAATTGAGGGATCACAGGTAACCTTTGATGTAGCTTGGTCTCCAAAGAACAT
AGACAGAAGATGCTATAATTATACTGGAATCGCAGATGCTTGTGACTTCCTCTTTGTGATGTCTTATGAT
GAACAAAGTCAGATCTGGTCAGAATGTATTGCAGCAGCCAATGCTCCCTATAATCAGACATTAACTGGAT
ATAATGACTACATCAAGATGAGCATTAATCCTAAGAAACTTGTAATGGGTGTTCCTTGGTATGGTTATGA
TTATACCTGCCTGAATCTGTCTGAGGATCATGTTTGTACCATTGCAAAAGTCCCTTTCCGGGGGGCTCCT
TGTAGTGACGCTGCAGGACGTCAGGTGCCCTACAAAACGATCATGAAGCAAATAAATAGTTCTATTTCTG
GAAACCTATGGGATAAAGATCAGCGGGCTCCTTATTATAACTATAAAGATCCTGCTGGCCACTTTCATCA
AGTATGGTATGATAACCCTCAGAGTATTTCTTTAAAGGCAACATATATACAAAACTATCGCTTACGGGGC
ATTGGCATGTGGAATGCAAACTGTCTTGACTACTCTGGAGATGCTGTAGCCAAACAGCAAACTGAAGAAA
TGTGGGAAGTCTTAAAGCCAAAGCTGTTACAGAGATGA

Translation (385 aa):
MSRPQLRRWRLVSSPPSGVPGLALLALLALLALRLAAGTDCPCPEPELCRPIRHHPDFEVFVFDVGQKTW
KSYDWSQITTVATFGKYDSELMCYAHSKGARVVLKGDVSLKDIIDPAFRASWIAQKLNLAKTQYMDGINI
DIEQEVNCLSPEYDALTALVKETTDSFHREIEGSQVTFDVAWSPKNIDRRCYNYTGIADACDFLFVMSYD
EQSQIWSECIAAANAPYNQTLTGYNDYIKMSINPKKLVMGVPWYGYDYTCLNLSEDHVCTIAKVPFRGAP
CSDAAGRQVPYKTIMKQINSSISGNLWDKDQRAPYYNYKDPAGHFHQVWYDNPQSISLKATYIQNYRLRG
IGMWNANCLDYSGDAVAKQQTEEMWEVLKPKLLQR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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