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Report for CCDS707.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
707.1 Public Homo sapiens 1 ZNHIT6 24 110 108 CCDS HistoryNCBI Gene:54680Re-query CCDS DB by CCDS ID:707.1Re-query CCDS DB by GeneID:54680See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 707.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000370574.4 ENSP00000359606.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000370574.4Link to Ensembl Protein Viewer:ENSP00000359606.3Re-query CCDS DB by Nucleotide ID:ENST00000370574Re-query CCDS DB by Protein ID:ENSP00000359606
Original member Current member NCBI NM_017953.4 NP_060423.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_017953.4Link to Protein Sequence:NP_060423.3Re-query CCDS DB by Nucleotide ID:NM_017953Re-query CCDS DB by Protein ID:NP_060423Link to BLAST:NP_060423.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060423.3 470 Q9NWK9-1 470 100% 0 0

Chromosomal Locations for CCDS 707.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 85654058 85654098 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 85657847 85657971 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 85677236 85677313 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 85678701 85678781 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 85680836 85680904 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 85702157 85702260 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 85706078 85706163 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 85706249 85706355 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 85706442 85706507 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 85707629 85708284 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1413 nt):
ATGGAGTTTGCTGCTGAAAATGAAGGGAAGTCTGGGGGAGGTCTCCACAGCGTAGCTGAGGGGGTGCGGC
TAAGTCCAGAGCCTGGCAGGGAGGGAGTAAGGGACTTAGCAGGGGCGGAGGAGTTCGGCGGCGGAGAGGA
GGGGACAGGGCTGACAGGGATAAAGGAGATAGGGGATGGAGAGGAAGGAAGTGGACAAAGGCCAGAGGAA
ATACCGATGGACCTAACGGTAGTGAAGCAGGAAATTATAGACTGGCCAGGTACAGAAGGCAGGTTGGCTG
GCCAGTGGGTAGAACAGGAGGTGGAGGATAGGCCTGAGGTGAAGGATGAGAACGCAGGCGTATTGGAGGT
GAAGCAGGAGACGGATAGTAGTTTAGTGGTAAAAGAAGCGAAGGTGGGTGAACCAGAGGTAAAGGAAGAG
AAGGTAAAGGAAGAGGTAATGGACTGGTCAGAAGTGAAGGAAGAGAAGGATAACTTGGAGATAAAACAGG
AGGAGAAGTTTGTTGGTCAATGCATAAAAGAGGAATTGATGCATGGAGAGTGTGTAAAAGAAGAGAAGGA
TTTCCTGAAGAAAGAAATCGTGGATGATACAAAGGTGAAAGAAGAGCCTCCGATAAATCACCCGGTGGGC
TGCAAGCGGAAACTGGCCATGTCAAGGTGTGAGACTTGTGGTACAGAAGAAGCAAAGTACAGATGTCCAC
GTTGTATGCGATATTCCTGCAGTTTGCCCTGTGTAAAGAAACACAAAGCAGAACTGACATGTAATGGAGT
TCGAGATAAAACTGCATACATTTCAATACAACAGTTTACTGAAATGAATCTCCTAAGTGATTATCGATTT
TTGGAAGATGTGGCAAGAACAGCGGACCATATTTCTAGAGATGCTTTTTTGAAGAGACCAATAAGCAATA
AATATATGTACTTTATGAAAAATCGTGCCCGGAGGCAAGGTATTAACTTAAAACTTCTACCCAATGGATT
CACCAAGAGGAAGGAGAATTCAACCTTTTTTGATAAGAAAAAACAACAGTTTTGTTGGCATGTGAAGCTC
CAGTTTCCTCAAAGTCAAGCTGAGTACATAGAAAAAAGAGTACCAGATGATAAAACTATTAATGAAATCC
TAAAACCTTACATTGATCCTGAAAAGTCTGATCCTGTAATTCGTCAAAGGTTGAAAGCCTACATTCGCTC
TCAGACTGGGGTTCAGATTTTAATGAAGATTGAATATATGCAGCAAAATTTAGTAAGATATTATGAACTA
GATCCTTATAAAAGTCTCCTAGACAATTTGAGGAACAAAGTGATCATTGAGTATCCAACATTACATGTGG
TATTGAAAGGATCCAATAATGACATGAAAGTTCTTCACCAAGTGAAGAGTGAATCTACCAAGAACGTTGG
CAATGAAAATTGA

Translation (470 aa):
MEFAAENEGKSGGGLHSVAEGVRLSPEPGREGVRDLAGAEEFGGGEEGTGLTGIKEIGDGEEGSGQRPEE
IPMDLTVVKQEIIDWPGTEGRLAGQWVEQEVEDRPEVKDENAGVLEVKQETDSSLVVKEAKVGEPEVKEE
KVKEEVMDWSEVKEEKDNLEIKQEEKFVGQCIKEELMHGECVKEEKDFLKKEIVDDTKVKEEPPINHPVG
CKRKLAMSRCETCGTEEAKYRCPRCMRYSCSLPCVKKHKAELTCNGVRDKTAYISIQQFTEMNLLSDYRF
LEDVARTADHISRDAFLKRPISNKYMYFMKNRARRQGINLKLLPNGFTKRKENSTFFDKKKQQFCWHVKL
QFPQSQAEYIEKRVPDDKTINEILKPYIDPEKSDPVIRQRLKAYIRSQTGVQILMKIEYMQQNLVRYYEL
DPYKSLLDNLRNKVIIEYPTLHVVLKGSNNDMKVLHQVKSESTKNVGNEN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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