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Report for CCDS7080.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7080.1 Public Homo sapiens 10 KIN 24 110 108 CCDS HistoryNCBI Gene:22944Re-query CCDS DB by CCDS ID:7080.1Re-query CCDS DB by GeneID:22944See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7080.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000379562.9 ENSP00000368881.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000379562.9Link to Ensembl Protein Viewer:ENSP00000368881.3Re-query CCDS DB by Nucleotide ID:ENST00000379562Re-query CCDS DB by Protein ID:ENSP00000368881
Original member Current member NCBI NM_012311.4 NP_036443.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_012311.4Link to Protein Sequence:NP_036443.1Re-query CCDS DB by Nucleotide ID:NM_012311Re-query CCDS DB by Protein ID:NP_036443Link to BLAST:NP_036443.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_036443.1 393 O60870-1 393 100% 0 0

Chromosomal Locations for CCDS 7080.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 7756080 7756142 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 7759890 7759990 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 7762457 7762556 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 7763723 7763791 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 7766053 7766103 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 7769216 7769345 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 7774831 7774891 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 7775751 7775799 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 7778838 7779019 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 7780056 7780178 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 7780264 7780307 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 7783081 7783175 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 7787820 7787933 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1182 nt):
ATGGGGAAGTCGGATTTTCTTACTCCCAAGGCTATCGCCAACAGGATCAAGTCCAAGGGGCTGCAGAAGC
TACGCTGGTATTGCCAGATGTGCCAGAAGCAGTGCCGGGACGAGAATGGCTTTAAGTGTCATTGTATGTC
CGAATCTCATCAGAGACAACTATTGCTGGCTTCAGAAAATCCTCAGCAGTTTATGGATTATTTTTCAGAG
GAATTCCGAAATGACTTTCTAGAACTTCTCAGGAGACGCTTTGGCACTAAAAGGGTCCACAACAACATTG
TCTACAACGAATACATCAGCCACCGAGAGCACATCCACATGAATGCCACTCAGTGGGAAACTCTGACTGA
TTTTACTAAGTGGCTGGGCAGAGAAGGCTTGTGCAAAGTGGACGAGACACCAAAAGGCTGGTATATTCAG
TACATAGACAGGGACCCAGAAACTATCCGCCGGCAACTGGAACTGGAGAAAAAGAAAAAGCAGGACCTTG
ATGATGAAGAAAAAACTGCCAAATTTATTGAAGAGCAAGTGAGAAGAGGCCTGGAAGGGAAGGAACAGGA
GGTCCCTACTTTTACGGAATTAAGCAGAGAAAATGATGAAGAGAAAGTCACGTTTAATTTGAGTAAAGGA
GCATGTAGCTCATCCGGAGCAACATCTTCCAAGTCAAGTACTCTGGGACCGAGTGCACTGAAGACGATAG
GAAGTTCAGCATCAGTGAAACGAAAAGAATCTTCCCAGAGCTCAACTCAGTCTAAAGAAAAGAAGAAAAA
GAAATCTGCACTGGATGAAATCATGGAGATTGAAGAGGAAAAGAAAAGAACTGCCCGAACAGACTACTGG
CTACAGCCTGAAATTATTGTGAAAATTATAACCAAGAAACTGGGAGAGAAATATCATAAGAAAAAGGCTA
TTGTTAAGGAAGTAATTGACAAATATACAGCTGTTGTGAAGATGATTGATTCTGGAGACAAGCTGAAACT
TGACCAGACTCATTTAGAGACAGTAATTCCAGCACCAGGAAAAAGAATTCTAGTTTTAAATGGAGGCTAC
AGAGGAAATGAAGGTACCCTAGAATCCATCAATGAGAAGACTTTTTCAGCTACTATCGTCATTGAAACTG
GCCCTTTAAAAGGACGCAGAGTTGAAGGAATTCAATATGAAGACATTTCTAAACTTGCCTGA

Translation (393 aa):
MGKSDFLTPKAIANRIKSKGLQKLRWYCQMCQKQCRDENGFKCHCMSESHQRQLLLASENPQQFMDYFSE
EFRNDFLELLRRRFGTKRVHNNIVYNEYISHREHIHMNATQWETLTDFTKWLGREGLCKVDETPKGWYIQ
YIDRDPETIRRQLELEKKKKQDLDDEEKTAKFIEEQVRRGLEGKEQEVPTFTELSRENDEEKVTFNLSKG
ACSSSGATSSKSSTLGPSALKTIGSSASVKRKESSQSSTQSKEKKKKKSALDEIMEIEEEKKRTARTDYW
LQPEIIVKIITKKLGEKYHKKKAIVKEVIDKYTAVVKMIDSGDKLKLDQTHLETVIPAPGKRILVLNGGY
RGNEGTLESINEKTFSATIVIETGPLKGRRVEGIQYEDISKLA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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