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Report for CCDS70868.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
70868.1 Public Mus musculus 18 Epc1 23 108 98 CCDS HistoryNCBI Gene:13831Re-query CCDS DB by CCDS ID:70868.1Re-query CCDS DB by GeneID:13831See the combined annotation on chromosome 18 in Sequence Viewer

Public since: CCDS release 16, NCBI annotation release 104, Ensembl annotation release 75

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 70868.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000050542.5 ENSMUSP00000060599.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000050542.5Link to Ensembl Protein Viewer:ENSMUSP00000060599.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000050542Re-query CCDS DB by Protein ID:ENSMUSP00000060599
Original member Current member NCBI NM_001276350.1 NP_001263279.1 Accepted alive Link to Nucleotide Sequence:NM_001276350.1Link to Protein Sequence:NP_001263279.1Re-query CCDS DB by Nucleotide ID:NM_001276350Re-query CCDS DB by Protein ID:NP_001263279Link to BLAST:NP_001263279.1

Chromosomal Locations for CCDS 70868.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 18 (NC_000084.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18See the combined annotation on chromosome 18 in Sequence Viewer

Chromosome Start Stop Links
18 6489298 6489330 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 6490463 6490615 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (186 nt):
ATGAGTAAACTGTCGTTTCGGGCGCGGGCGCTGGACGCCTCGAAGCCGCTGCCGGTCTTCCGCTGTGAGG
ATCTGCCCGACCTGCACGAATACGCCTCGATAAACCGGGCCGTGCCGCAGATGCCCACCGGGATGGAGAA
GGAAGAGGAGTCGGTACAGCCACTTATACAGGGTGCAGTGTGTTGA

Translation (61 aa):
MSKLSFRARALDASKPLPVFRCEDLPDLHEYASINRAVPQMPTGMEKEEESVQPLIQGAVC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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