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Report for CCDS7102.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7102.1 Public Homo sapiens 10 FAM107B 24 110 108 CCDS HistoryNCBI Gene:83641Re-query CCDS DB by CCDS ID:7102.1Re-query CCDS DB by GeneID:83641See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7102.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000181796.7 ENSP00000181796.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000181796.7Link to Ensembl Protein Viewer:ENSP00000181796.2Re-query CCDS DB by Nucleotide ID:ENST00000181796Re-query CCDS DB by Protein ID:ENSP00000181796
Original member Current member NCBI NM_031453.4 NP_113641.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_031453.4Link to Protein Sequence:NP_113641.2Re-query CCDS DB by Nucleotide ID:NM_031453Re-query CCDS DB by Protein ID:NP_113641Link to BLAST:NP_113641.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_113641.2 306 Q9H098-2 306 100% 0 0

Chromosomal Locations for CCDS 7102.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 14521190 14521306 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 14521869 14522019 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 14530332 14530515 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 14667634 14667691 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 14774253 14774663 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (921 nt):
ATGTCCACGTGGAAAGCAAGACTCACCAAAAGACTGAAGTCTCCCTCTAGAAGCATGCATCCATTTCCGT
GCTCAGCTCTGCTCGCCTGTTTTGGGAATACGAGGGAGAGTGCTTCCTTCAATCAGTCCGGCGTGGCTGA
TACTCATTCCACCGTCCGTGTGCAGCCTGTGGCCAAAGCAGGCAGACAGCCAAGACACCCAAGCGCAGAA
GGAGCTCCAGAGAAAAGGCAAGATTCGAGCACCCATGCAGAGAGAAATGGCAGTGCGAATCGGAATTCAA
GTCACCGCACTGCGGCCCAGCCCGCGGAGACGCCTGAAGATGTGCCCGGGTCCCTGGATGATGGGGCGGA
CTGTGAAGCAGTGGTGTTTCACGCTTCCATCCCCAGACCATCAATTATTGACACGCCCAAGGAAGAAGAA
TTTCGAGAAGAACCTAAATGCCTCGAGCTGGAGCAGAAAATGACATCAGACAGCCCACCTGAGGATATTG
ACCATAAGGACTCATATCTCATTACAAGAAGCATCATGGCCGAGCCAGACTACATAGAAGATGACAATCC
TGAACTCATTAGGCCTCAGAAACTGATCAATCCTGTAAAAACCTCCCGGAACCATCAAGATCTTCACAGA
GAACTTCTTATGAATCAAAAAAGGGGTCTTGCTCCTCAGAACAAACCAGAATTGCAGAAGGTGATGGAAA
AAAGAAAACGAGACCAAGTAATAAAGCAGAAGGAAGAAGAAGCACAGAAGAAGAAATCTGACTTGGAAAT
AGAGCTATTAAAACGGCAGCAGAAGTTGGAGCAGCTTGAACTTGAGAAGCAGAAATTGCAAGAAGAGCAA
GAAAATGCCCCCGAGTTTGTGAAGGTGAAAGGCAATCTCAGGAGAACAGGCCAAGAAGTCGCCCAAGCCC
AGGAGTCCTAG

Translation (306 aa):
MSTWKARLTKRLKSPSRSMHPFPCSALLACFGNTRESASFNQSGVADTHSTVRVQPVAKAGRQPRHPSAE
GAPEKRQDSSTHAERNGSANRNSSHRTAAQPAETPEDVPGSLDDGADCEAVVFHASIPRPSIIDTPKEEE
FREEPKCLELEQKMTSDSPPEDIDHKDSYLITRSIMAEPDYIEDDNPELIRPQKLINPVKTSRNHQDLHR
ELLMNQKRGLAPQNKPELQKVMEKRKRDQVIKQKEEEAQKKKSDLEIELLKRQQKLEQLELEKQKLQEEQ
ENAPEFVKVKGNLRRTGQEVAQAQES


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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