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Report for CCDS71400.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
71400.1 Public Mus musculus 4 Zfp37 23 108 98 CCDS HistoryNCBI Gene:22696Re-query CCDS DB by CCDS ID:71400.1Re-query CCDS DB by GeneID:22696See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 16, NCBI annotation release 104, Ensembl annotation release 75

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 71400.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000068822.3 ENSMUSP00000070463.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000068822.3Link to Ensembl Protein Viewer:ENSMUSP00000070463.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000068822Re-query CCDS DB by Protein ID:ENSMUSP00000070463
Original member NCBI NM_001290350.1 NP_001277279.1 Updated not alive Link to Nucleotide Sequence:NM_001290350.1Link to Protein Sequence:NP_001277279.1Re-query CCDS DB by Nucleotide ID:NM_001290350Re-query CCDS DB by Protein ID:NP_001277279
Current member NCBI NM_001290350.2 NP_001277279.1 Accepted alive Link to Nucleotide Sequence:NM_001290350.2Link to Protein Sequence:NP_001277279.1Re-query CCDS DB by Nucleotide ID:NM_001290350Re-query CCDS DB by Protein ID:NP_001277279Link to BLAST:NP_001277279.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001277279.1 594 P17141 594 100% 0 0

Chromosomal Locations for CCDS 71400.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 62191164 62192689 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 62204519 62204650 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 62205024 62205108 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 62208320 62208361 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1785 nt):
ATGGCTACATCCGAGCCTGCGGAAAGCGATGCGGTGAGGGCGAAGGAATGGGAGCAGCTGGAACCTGTGC
AGAGAGATGTGTACAAGGATACGAAGCTAGAGAACTGCAGCAATCCAGCCTCCATGGGAAATCAAGATCC
CAAACAAGACATAGTCTCCGTGTTGGAAGAAGAAGAGCCATCATCGGGAAAGGGGAAAAAAGCCAGCCCA
AGTAGTCTGAAAAAAATAGCAAGGCCCAAGACAGCAGGAACAAGTGCAAAACTCCAACAAGATGATGAGC
ATAGGGAGGAAAAGCAGAAGTCCCAAAGCAAACTTACTAAGGAAGTGACACTCAGGAAGAAAAGTTCCAA
CAGCAAGAAAAGCAGTGAGTATGGTTTGTTGGAGAACAAAAGTCTCCACTCAAAACACACTCCTTCCGAG
AAAAAACTGCTTAAGTCCAGTTCCCGTGGGAAGAACTCGAATCAGAATTCAGACTCTCTGAAAAAGAAAC
CTGACACAGCTAATGACCACAGGAAATCACTCAGCCATTCTGCATCTGATGTGAACAAAGATGAAATTCC
AACTAGAAAGAAATGCGACAAGTTACCCAACAATAAGTTGTCTGATAAAGGTGACAAAAACCAAACCAGC
AAAAAATGTGAGAAAGTATGCCGTCATAGTGCATCCCATACCAAGGAAGACAAAATTCAGACCGGGGAGA
AACGGAAATCACACTGCCGTACTCCATCTAAACCTGAAAAAGCCCCAGGTTCTGGGAAACCTTATGAATG
TAACCACTGTGGGAAGGTCCTCAGCCATAAACAGGGACTCCTTGACCATCAAAGAACTCACACTGGGGAG
AAACCATATGAATGTAATGAATGTGGGATAGCTTTCAGCCAGAAGTCCCACCTTGTTGTACATCAGAGAA
CTCACACTGGGGAAAAACCATACGAGTGTGAACAGTGTGGCAAAGCACACGGACATAAACATGCCCTCAC
TGACCATCTAAGAATCCATACTGGAGAAAAGCCCTACAAATGTAATGAATGTGGCAAAACGTTTAGACAC
AGCTCAAACCTTATGCAACACCTAAGATCTCACACGGGTGAGAAGCCGTATGAATGTAAGGAATGTGGCA
AATCCTTTAGATATAATTCATCTCTTACTGAACATGTGAGAACACACACAGGTGAAATACCATACGAATG
TAACGAATGTGGCAAAGCTTTCAAGTATGGCTCATCCCTGACTAAACATATGCGGATTCATACAGGGGAG
AAACCATTTGAATGTAATGAATGTGGGAAAACTTTTAGCAAAAAGTCACACCTAGTTATACATCAAAGAA
CTCATACAAAGGAGAAACCTTATAAATGTGATGAGTGTGGGAAAGCCTTTGGACATAGCTCATCTCTTAC
CTACCATATGAGAACTCATACAGGTGACTGCCCCTTTGAATGTAATCAATGTGGTAAGGCCTTTAAACAG
ATTGAAGGCCTTACCCAACACCAGAGAGTTCACACAGGGGAGAAACCCTATGAGTGTGTTGAATGTGGGA
AAGCCTTTAGTCAGAAGTCACACCTCATCGTACACCAGAGAACTCATACAGGGGAGAAACCCTTTGAATG
TTATGAGTGTGGAAAAGCCTTCAATGCAAAATCACAACTTGTTATTCATCAGAGATCCCACACTGGAGAG
AAACCCTATGAATGTATTGAATGTGGTAAAGCCTTCAAGCAAAATGCCTCTCTTACCAAACATATGAAAA
TTCACTCAGAAGAACAATCTGAGGAAGAAGATTAA

Translation (594 aa):
MATSEPAESDAVRAKEWEQLEPVQRDVYKDTKLENCSNPASMGNQDPKQDIVSVLEEEEPSSGKGKKASP
SSLKKIARPKTAGTSAKLQQDDEHREEKQKSQSKLTKEVTLRKKSSNSKKSSEYGLLENKSLHSKHTPSE
KKLLKSSSRGKNSNQNSDSLKKKPDTANDHRKSLSHSASDVNKDEIPTRKKCDKLPNNKLSDKGDKNQTS
KKCEKVCRHSASHTKEDKIQTGEKRKSHCRTPSKPEKAPGSGKPYECNHCGKVLSHKQGLLDHQRTHTGE
KPYECNECGIAFSQKSHLVVHQRTHTGEKPYECEQCGKAHGHKHALTDHLRIHTGEKPYKCNECGKTFRH
SSNLMQHLRSHTGEKPYECKECGKSFRYNSSLTEHVRTHTGEIPYECNECGKAFKYGSSLTKHMRIHTGE
KPFECNECGKTFSKKSHLVIHQRTHTKEKPYKCDECGKAFGHSSSLTYHMRTHTGDCPFECNQCGKAFKQ
IEGLTQHQRVHTGEKPYECVECGKAFSQKSHLIVHQRTHTGEKPFECYECGKAFNAKSQLVIHQRSHTGE
KPYECIECGKAFKQNASLTKHMKIHSEEQSEEED


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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