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Report for CCDS7146.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7146.1 Public Homo sapiens 10 ENKUR 24 110 108 CCDS HistoryNCBI Gene:219670Re-query CCDS DB by CCDS ID:7146.1Re-query CCDS DB by GeneID:219670See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7146.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000331161.9 ENSP00000331044.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000331161.9Link to Ensembl Protein Viewer:ENSP00000331044.4Re-query CCDS DB by Nucleotide ID:ENST00000331161Re-query CCDS DB by Protein ID:ENSP00000331044
Original member Current member EBI ENST00000496261.6 ENSP00000432930.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000496261.6Link to Ensembl Protein Viewer:ENSP00000432930.1Re-query CCDS DB by Nucleotide ID:ENST00000496261Re-query CCDS DB by Protein ID:ENSP00000432930
Original member Current member NCBI NM_145010.4 NP_659447.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_145010.4Link to Protein Sequence:NP_659447.1Re-query CCDS DB by Nucleotide ID:NM_145010Re-query CCDS DB by Protein ID:NP_659447Link to BLAST:NP_659447.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_659447.1 256 Q8TC29 256 100% 0 0

Chromosomal Locations for CCDS 7146.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 24984370 24984376 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 24984736 24984905 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 24990463 24990609 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 24995646 24995869 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 24999401 24999546 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 25015860 25015936 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (771 nt):
ATGGATCCAACGTGCTCTTCTGAGTGCATTTATAACCTCATACCCAGTGACTTGAAGGAGCCTCCCCAGC
CTCCTAGGTACATATCCATTTTTAAGGCAACTGTAAAAGATGACATGCAAAAAGCTAAAACTGCAATGAA
AACTATGGGACCAGCAAAAGTTGAAGTACCTTCTCCAAAGGATTTCCTAAAGAAACATTCAAAGGAAAAA
ACTCTACCACCCAAAAAAAACTTTGATCGGAACGTGCCCAAAAAGCCTGCTGTGCCATTGAAGACTGATC
ATCCTGTCATGGGAATACAGAGTGGAAAAAATTTTATAAATACAAATGCAGCTGATATCATCATGGGAGT
GGCTAAAAAGCCTAAACCAATTTATGTTGATAAAAGAACTGGAGACAAGCATGATCTTGAGCCTTCAGGA
CTAGTTCCAAAGTACATCAATAAAAAGGATTATGGTGTCACACCTGAATACATATGTAAGCGAAACGAGG
AAATAAAGAAAGCCCAAGAAGACTATGATCGTTATATCCAGGAAAACCTTAAGAAAGCAGCTATGAAAAG
GCTCTCCGATGAAGAAAGGGAGGCAGTTTTGCAGGGGCTGAAAAAGAACTGGGAAGAGGTGCATAAAGAA
TTCCAGTCCCTCTCGGTCTTTATAGATTCTATACCAAAGAAGATCCGCAAGCAGAGGCTGGAAGAAGAAA
TGAAACAACTAGAACACGACATTGGCATAATTGAAAAGCACAAGATTATTTATATTGCCAATAACGCATG
A

Translation (256 aa):
MDPTCSSECIYNLIPSDLKEPPQPPRYISIFKATVKDDMQKAKTAMKTMGPAKVEVPSPKDFLKKHSKEK
TLPPKKNFDRNVPKKPAVPLKTDHPVMGIQSGKNFINTNAADIIMGVAKKPKPIYVDKRTGDKHDLEPSG
LVPKYINKKDYGVTPEYICKRNEEIKKAQEDYDRYIQENLKKAAMKRLSDEEREAVLQGLKKNWEEVHKE
FQSLSVFIDSIPKKIRKQRLEEEMKQLEHDIGIIEKHKIIYIANNA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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